Temporal changes in DNA methylation and RNA expression in a small song bird: within-and between-tissue comparisons

M Lindner, I Verhagen, HM Viitaniemi, VN Laine… - BMC genomics, 2021 - Springer
Background DNA methylation is likely a key mechanism regulating changes in gene
transcription in traits that show temporal fluctuations in response to environmental …

SAMD9 is a (epi-) genetically regulated anti-inflammatory factor activated in RA patients

P He, LF Wu, PF Bing, W Xia, L Wang, FF Xie… - Molecular and Cellular …, 2019 - Springer
To identify PBMC-expressed genes significant for RA, and to ascertain their upstream
regulatory factors, as well as downstream functional effects relevant to RA pathogenesis. We …

Dietary omega-3 fatty acid intake impacts peripheral blood DNA methylation-anti-inflammatory effects and individual variability in a pilot study

DE Frankhouser, S Steck, MG Sovic, MA Belury… - The Journal of nutritional …, 2022 - Elsevier
Abstract Omega-3 or n-3 polyunsaturated fatty acids (PUFAs) are widely studied for health
benefits that may relate to anti-inflammatory activity. However, mechanisms mediating an …

Epigenetically regulated co-expression network of genes significant for rheumatoid arthritis

P He, XB Mo, SF Lei, FY Deng - Epigenomics, 2019 - Taylor & Francis
Aim: To identify epigenetically regulated network of genes in peripheral blood mononuclear
cells significant for rheumatoid arthritis (RA). Methods: Differentially expressed genes …

Replicated umbilical cord blood DNA methylation loci associated with gestational age at birth

TP York, SJ Latendresse, C Jackson-Cook… - Epigenetics, 2020 - Taylor & Francis
ABSTRACT DNA methylation is highly sensitive to in utero perturbations and has an
established role in both embryonic development and regulation of gene expression. The …

DiffRS-net: A Novel Framework for Classifying Breast Cancer Subtypes on Multi-Omics Data

P Zeng, C Huang, Y Huang - Applied Sciences, 2024 - mdpi.com
The precise classification of breast cancer subtypes is crucial for clinical diagnosis and
treatment, yet early symptoms are often subtle. The use of multi-omics data from high …

Epigenetically-regulated RPN2 gene influences lymphocyte activation and is involved in pathogenesis of rheumatoid arthritis

P He, FY Deng, BH Wang, LF Wu, X Zhou, SF Lei - Gene, 2022 - Elsevier
Background To identify RA-associated genes and to ascertain epigenetic factors and
functional mechanisms underlying RA pathogenesis. Methods Peripheral blood …

Large-scale integration of DNA methylation and gene expression array platforms identifies both cis and trans relationships

EE Lancaster, VI Vladimirov, BP Riley, JW Landry… - Epigenetics, 2022 - Taylor & Francis
Although epigenome-wide association studies (EWAS) have been successful in identifying
DNA methylation (DNAm) patterns associated with disease states, any further …

FRA-2 mRNA 表达及DNA 甲基化水平与代谢综合征的相关性研究

杜晴晴, 侯泽鑫, 李军, 胡颖, 曹国磊… - 上海交通大学学报 …, 2022 - xuebao.shsmu.edu.cn
目的· 探讨Fos 相关抗原-2 (Fos-related antigen-2, FRA-2) mRNA 表达水平及DNA
甲基化水平与代谢综合征(metabolic syndrome, MS) 的关系. 方法· 采用病例-对照研究方法 …

Avian seasonal reproduction in times of global warming: Insights from evolution, ecology and (epi-) genomics

M Lindner - 2022 - research.rug.nl
In this thesis, I focused on avian seasonal reproduction in times of global warming in the
great tit study population at the Hoge Veluwe. I assessed the evolutionary implications of the …