Current challenges and opportunities in treating glioblastoma

A Shergalis, A Bankhead, U Luesakul… - Pharmacological …, 2018 - ASPET
Glioblastoma multiforme (GBM), the most common and aggressive primary brain tumor, has
a high mortality rate despite extensive efforts to develop new treatments. GBM exhibits both …

Principles and challenges of genome-wide DNA methylation analysis

PW Laird - Nature Reviews Genetics, 2010 - nature.com
Methylation of cytosine bases in DNA provides a layer of epigenetic control in many
eukaryotes that has important implications for normal biology and disease. Therefore …

Loss of Karma transposon methylation underlies the mantled somaclonal variant of oil palm

M Ong-Abdullah, JM Ordway, N Jiang, SE Ooi, SY Kok… - Nature, 2015 - nature.com
Somaclonal variation arises in plants and animals when differentiated somatic cells are
induced into a pluripotent state, but the resulting clones differ from each other and from their …

[HTML][HTML] High density DNA methylation array with single CpG site resolution

M Bibikova, B Barnes, C Tsan, V Ho, B Klotzle, JM Le… - Genomics, 2011 - Elsevier
We have developed a new generation of genome-wide DNA methylation BeadChip which
allows high-throughput methylation profiling of the human genome. The new high density …

[HTML][HTML] SWAN: Subset-quantile within array normalization for illumina infinium HumanMethylation450 BeadChips

J Maksimovic, L Gordon, A Oshlack - Genome biology, 2012 - Springer
DNA methylation is the most widely studied epigenetic mark and is known to be essential to
normal development and frequently disrupted in disease. The Illumina …

Highlights of the DNA cutters: a short history of the restriction enzymes

WAM Loenen, DTF Dryden, EA Raleigh… - Nucleic acids …, 2014 - academic.oup.com
Abstract In the early 1950's,'host-controlled variation in bacterial viruses' was reported as a
non-hereditary phenomenon: one cycle of viral growth on certain bacterial hosts affected the …

Genome-Wide Dna Methylation Profiling Using Infinium® Assay

M Bibikova, J Le, B Barnes, S Saedinia-Melnyk… - …, 2009 - Taylor & Francis
Aims: Bisulfite sequence analysis of individual CpG sites within genomic DNA is a powerful
approach for methylation analysis in the genome. The major limitation of bisulfite-based …

A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis

TA Down, VK Rakyan, DJ Turner, P Flicek, H Li… - Nature …, 2008 - nature.com
DNA methylation is an indispensible epigenetic modification required for regulating the
expression of mammalian genomes. Immunoprecipitation-based methods for DNA …

Comprehensive high-throughput arrays for relative methylation (CHARM)

RA Irizarry, C Ladd-Acosta, B Carvalho, H Wu… - Genome …, 2008 - genome.cshlp.org
This study was originally conceived to test in a rigorous way the specificity of three major
approaches to high-throughput array-based DNA methylation analysis:(1) MeDIP, or …

Intergenerational transmission of glucose intolerance and obesity by in utero undernutrition in mice

JC Jimenez-Chillaron, E Isganaitis… - Diabetes, 2009 - Am Diabetes Assoc
OBJECTIVE—Low birth weight (LBW) is associated with increased risk of obesity, diabetes,
and cardiovascular disease during adult life. Moreover, this programmed disease risk can …