Epigenetic modification in Parkinson's disease

H Song, J Chen, J Huang, P Sun, Y Liu, L Xu… - Frontiers in Cell and …, 2023 - frontiersin.org
Parkinson's disease (PD) is a common neurodegenerative disorder caused by genetic,
epigenetic, and environmental factors. Recent advance in genomics and epigenetics have …

DNA methylation in poultry: a review

X Ju, Z Wang, D Cai, SF Bello, Q Nie - Journal of Animal Science and …, 2023 - Springer
As an important epigenetic modification, DNA methylation is involved in many biological
processes such as animal cell differentiation, embryonic development, genomic imprinting …

Base editing-mediated one-step inactivation of the Dnmt gene family reveals critical roles of DNA methylation during mouse gastrulation

Q Li, J Lu, X Yin, Y Chang, C Wang, M Yan… - Nature …, 2023 - nature.com
During embryo development, DNA methylation is established by DNMT3A/3B and
subsequently maintained by DNMT1. While much research has been done in this field, the …

[HTML][HTML] DeepSF-4mC: A deep learning model for predicting DNA cytosine 4mC methylation sites leveraging sequence features

Z Yao, F Li, W Xie, J Chen, J Wu, Y Zhan, X Wu… - Computers in Biology …, 2024 - Elsevier
Abstract N 4-methylcytosine (4mC) is a DNA modification involving the addition of a methyl
group to the fourth nitrogen atom of the cytosine base. This modification may influence gene …

Epigenetic role of LINE-1 methylation and key genes in pregnancy maintenance

V Tisato, JA Silva, F Scarpellini, R Capucci, R Marci… - Scientific Reports, 2024 - nature.com
Spontaneous abortion is a pregnancy complication characterized by complex and
multifactorial etiology. About 5% of childbearing women are globally affected by early …

Expression analysis suggests that DNMT3L is required for oocyte de novo DNA methylation only in Muridae and Cricetidae rodents

L Behluli, AM Fontanilla, L Andessner-Angleitner… - Epigenetics & …, 2023 - Springer
Background During early mammalian development, DNA methylation undergoes two waves
of reprogramming, enabling transitions between somatic cells, oocyte and embryo. The first …

Maternal Exercise Prior to and during Gestation Induces Sex-Specific Alterations in the Mouse Placenta

ML Ruebel, SJ Borengasser, Y Zhong, P Kang… - International Journal of …, 2023 - mdpi.com
While exercise (EX) during pregnancy is beneficial for both mother and child, little is known
about the mechanisms by which maternal exercise mediates changes in utero. Six-week-old …

Integrative Epigenetic and Molecular Analysis Reveals a Novel Promoter for a New Isoform of the Transcription Factor TEAD4

S Rashidiani, G Mamo, B Farkas, A Szabadi… - International Journal of …, 2024 - mdpi.com
TEAD4 is a transcription factor that plays a crucial role in the Hippo pathway by regulating
the expression of genes related to proliferation and apoptosis. It is also involved in the …

[PDF][PDF] Deciphering the placental abnormalities associated with somatic cell nuclear transfer at single-nucleus resolution

L Jiang, X Wang, L Wang, S Ma, Y Ding, C Liu… - Protein & …, 2023 - academic.oup.com
The placenta connecting the fetus to the maternal uterus provides material exchange and an
immune-tolerant environment for the embryo in all eutherian mammals (Shao et al., 2022) …

CPMI: comprehensive neighborhood-based perturbed mutual information for identifying critical states of complex biological processes

J Ren, P Li, J Yan - BMC bioinformatics, 2024 - Springer
Background There exists a critical transition or tipping point during the complex biological
process. Such critical transition is usually accompanied by the catastrophic consequences …