[HTML][HTML] High-throughput proteomics: a methodological mini-review
Proteomics plays a vital role in biomedical research in the post-genomic era. With the
technological revolution and emerging computational and statistic models, proteomic …
technological revolution and emerging computational and statistic models, proteomic …
[HTML][HTML] Proteomics technologies for cancer liquid biopsies
Alterations in DNAs could not reveal what happened in proteins. The accumulated
alterations of DNAs would change the manifestation of proteins. Therefore, as is the case in …
alterations of DNAs would change the manifestation of proteins. Therefore, as is the case in …
[HTML][HTML] Global impact of somatic structural variation on the cancer proteome
F Chen, Y Zhang, DS Chandrashekar… - Nature …, 2023 - nature.com
Both proteome and transcriptome data can help assess the relevance of non-coding somatic
mutations in cancer. Here, we combine mass spectrometry-based proteomics data with …
mutations in cancer. Here, we combine mass spectrometry-based proteomics data with …
Deciphering combinatorial post-translational modifications by top-down mass spectrometry
JS Brodbelt - Current opinion in chemical biology, 2022 - Elsevier
Post-translational modifications (PTMs) create vast structural and functional diversity of
proteins, ultimately modulating protein function and degradation, influencing cellular …
proteins, ultimately modulating protein function and degradation, influencing cellular …
[HTML][HTML] An introduction to advanced targeted acquisition methods
M van Bentum, M Selbach - Molecular & Cellular Proteomics, 2021 - ASBMB
Targeted proteomics via selected reaction monitoring (SRM) or parallel reaction monitoring
(PRM) enables fast and sensitive detection of a preselected set of target peptides. However …
(PRM) enables fast and sensitive detection of a preselected set of target peptides. However …
Global, in situ analysis of the structural proteome in individuals with Parkinson's disease to identify a new class of biomarker
MT Mackmull, L Nagel, F Sesterhenn… - Nature structural & …, 2022 - nature.com
Parkinson's disease (PD) is a prevalent neurodegenerative disease for which robust
biomarkers are needed. Because protein structure reflects function, we tested whether …
biomarkers are needed. Because protein structure reflects function, we tested whether …
Clinical applications of mass spectrometry‐based proteomics in cancer: Where are we?
EL Boys, J Liu, PJ Robinson, RR Reddel - Proteomics, 2023 - Wiley Online Library
Tumor tissue processing methodologies in combination with data‐independent acquisition
mass spectrometry (DIA‐MS) have emerged that can comprehensively analyze the …
mass spectrometry (DIA‐MS) have emerged that can comprehensively analyze the …
[HTML][HTML] Liquid biopsies, novel approaches and future directions
A Armakolas, M Kotsari, J Koskinas - Cancers, 2023 - mdpi.com
Simple Summary The gold standard for detecting cancer and profiling tumors is tissue
biopsies. Despite this, tissue biopsies have been associated with many limitations leading to …
biopsies. Despite this, tissue biopsies have been associated with many limitations leading to …
[HTML][HTML] Non-small cell lung carcinoma (NSCLC): Implications on molecular pathology and advances in early diagnostics and therapeutics
Continuous revision of the histologic and stage-wise classification of lung cancer by the
World Health Organization (WHO) provides the foundation for therapeutic advances by …
World Health Organization (WHO) provides the foundation for therapeutic advances by …
[HTML][HTML] Omics-based investigations of breast cancer
Breast cancer (BC) is characterized by an extensive genotypic and phenotypic
heterogeneity. In-depth investigations into the molecular bases of BC phenotypes …
heterogeneity. In-depth investigations into the molecular bases of BC phenotypes …