[HTML][HTML] DNA methylation biomarkers: cancer and beyond

T Mikeska, JM Craig - Genes, 2014 - mdpi.com
Biomarkers are naturally-occurring characteristics by which a particular pathological process
or disease can be identified or monitored. They can reflect past environmental exposures …

Diet, nutrition, and cancer epigenetics

C Sapienza, JP Issa - Annual review of nutrition, 2016 - annualreviews.org
The search for a connection between diet and human cancer has a long history in cancer
research, as has interest in the mechanisms by which dietary factors might increase or …

[HTML][HTML] Identification of polymorphic and off-target probe binding sites on the Illumina Infinium MethylationEPIC BeadChip

DL McCartney, RM Walker, SW Morris, AM McIntosh… - Genomics data, 2016 - Elsevier
Genome-wide analysis of DNA methylation has now become a relatively inexpensive
technique thanks to array-based methylation profiling technologies. The recently developed …

[HTML][HTML] Epigenetics analysis and integrated analysis of multiomics data, including epigenetic data, using artificial intelligence in the era of precision medicine

R Hamamoto, M Komatsu, K Takasawa, K Asada… - Biomolecules, 2019 - mdpi.com
To clarify the mechanisms of diseases, such as cancer, studies analyzing genetic mutations
have been actively conducted for a long time, and a large number of achievements have …

[HTML][HTML] Cell-free DNA-methylation-based methods and applications in oncology

F Galardi, F De Luca, D Romagnoli, C Biagioni… - Biomolecules, 2020 - mdpi.com
Liquid biopsy based on cell-free DNA (cfDNA) enables non-invasive dynamic assessment of
disease status in patients with cancer, both in the early and advanced settings. The analysis …

Hypomethylation of repeated DNA sequences in cancer

JP Ross, KN Rand, PL Molloy - Epigenomics, 2010 - Future Medicine
An important feature of cancer development and progression is the change in DNA
methylation patterns, characterized by the hypermethylation of specific genes concurrently …

[HTML][HTML] Quantitative cross-validation and content analysis of the 450k DNA methylation array from Illumina, Inc.

J Roessler, O Ammerpohl, J Gutwein, B Hasemeier… - BMC research …, 2012 - Springer
Background The newly released 450k DNA methylation array from Illumina, Inc. offers the
possibility to analyze more than 480,000 individual CpG sites in a user friendly standardized …

[HTML][HTML] Impact of SNPs on methylation readouts by Illumina Infinium HumanMethylation450 BeadChip Array: implications for comparative population studies

P Daca-Roszak, A Pfeifer, J Żebracka-Gala, D Rusinek… - BMC genomics, 2015 - Springer
Abstract Background Infinium HumanMethylation 450 BeadChip Arrays by Illumina (Illumina
HM450K) are among the most popular CpG microarray platforms widely used in biological …

[HTML][HTML] Epigenetics, microbiota, and intraocular inflammation: New paradigms of immune regulation in the eye

X Wen, X Hu, L Miao, X Ge, Y Deng, PW Bible… - Progress in Retinal and …, 2018 - Elsevier
Sight threatening immune responses that damage the eye characterize intraocular
inflammatory diseases. These diseases including uveitis and age-related macular …

[HTML][HTML] Canine lymphoma, more than a morphological diagnosis: what we have learned about diffuse large B-cell lymphoma

L Aresu - Frontiers in Veterinary Science, 2016 - frontiersin.org
Diffuse large B-cell lymphoma (DLBCL) is the most common canine aggressive B-cell
lymphoma worldwide, and new recent molecular approaches have shown that DLBCL …