Non-CG methylation in the human genome
DNA methylation is a chemical modification that occurs predominantly on CG dinucleotides
in mammalian genomes. However, recent studies have revealed that non-CG methylation …
in mammalian genomes. However, recent studies have revealed that non-CG methylation …
Putting DNA methylation in context: from genomes to gene expression in plants
CE Niederhuth, RJ Schmitz - Biochimica et Biophysica Acta (BBA)-Gene …, 2017 - Elsevier
Plant DNA methylation is its own language, interpreted by the cell to maintain silencing of
transposons, facilitate chromatin structure, and to ensure proper expression of some genes …
transposons, facilitate chromatin structure, and to ensure proper expression of some genes …
De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes
We report de novo genome assemblies, transcriptomes, annotations, and methylomes for
the 26 inbreds that serve as the founders for the maize nested association mapping …
the 26 inbreds that serve as the founders for the maize nested association mapping …
[HTML][HTML] Integrative analysis of 111 reference human epigenomes
The reference human genome sequence set the stage for studies of genetic variation and its
association with human disease, but epigenomic studies lack a similar reference. To …
association with human disease, but epigenomic studies lack a similar reference. To …
The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut
DJ Bertioli, SB Cannon, L Froenicke, G Huang… - Nature …, 2016 - nature.com
Cultivated peanut (Arachis hypogaea) is an allotetraploid with closely related subgenomes
of a total size of∼ 2.7 Gb. This makes the assembly of chromosomal pseudomolecules very …
of a total size of∼ 2.7 Gb. This makes the assembly of chromosomal pseudomolecules very …
Widespread natural variation of DNA methylation within angiosperms
Background DNA methylation is an important feature of plant epigenomes, involved in the
formation of heterochromatin and affecting gene expression. Extensive variation of DNA …
formation of heterochromatin and affecting gene expression. Extensive variation of DNA …
Human body epigenome maps reveal noncanonical DNA methylation variation
Understanding the diversity of human tissues is fundamental to disease and requires linking
genetic information, which is identical in most of an individual's cells, with epigenetic …
genetic information, which is identical in most of an individual's cells, with epigenetic …
Widespread adenine N6-methylation of active genes in fungi
Abstract N6-methyldeoxyadenine (6mA) is a noncanonical DNA base modification present
at low levels in plant and animal genomes,,,, but its prevalence and association with …
at low levels in plant and animal genomes,,,, but its prevalence and association with …
Patterns of population epigenomic diversity
Natural epigenetic variation provides a source for the generation of phenotypic diversity, but
to understand its contribution to such diversity, its interaction with genetic variation requires …
to understand its contribution to such diversity, its interaction with genetic variation requires …
Dynamic DNA methylation reconfiguration during seed development and germination
Background Unlike animals, plants can pause their life cycle as dormant seeds. In both
plants and animals, DNA methylation is involved in the regulation of gene expression and …
plants and animals, DNA methylation is involved in the regulation of gene expression and …