SERS nanoparticles in medicine: from label-free detection to spectroscopic tagging
The development of diagnostic and therapeutic nanoparticles for biomedical applications is
of broad current interest in science, engineering, and medicine. The fundamental basis is …
of broad current interest in science, engineering, and medicine. The fundamental basis is …
[HTML][HTML] DeepCpG: accurate prediction of single-cell DNA methylation states using deep learning
Recent technological advances have enabled DNA methylation to be assayed at single-cell
resolution. However, current protocols are limited by incomplete CpG coverage and hence …
resolution. However, current protocols are limited by incomplete CpG coverage and hence …
YAP induces an oncogenic transcriptional program through TET1-mediated epigenetic remodeling in liver growth and tumorigenesis
Epigenetic remodeling is essential for oncogene-induced cellular transformation and
malignancy. In contrast to histone post-translational modifications, how DNA methylation is …
malignancy. In contrast to histone post-translational modifications, how DNA methylation is …
Rationally engineered nucleic acid architectures for biosensing applications
Development of biosensing platforms plays a key role in research settings for identification
of biomarkers and in clinical applications for diagnostics. Biosensors based on nucleic acids …
of biomarkers and in clinical applications for diagnostics. Biosensors based on nucleic acids …
[HTML][HTML] The molecular hallmarks of the serrated pathway in colorectal cancer
Colorectal cancer (CRC) is a leading cause of cancer death worldwide. It includes different
subtypes that differ in their clinical and prognostic features. In the past decade, in addition to …
subtypes that differ in their clinical and prognostic features. In the past decade, in addition to …
[HTML][HTML] Cancer epigenetics: from mechanism to therapy
MA Dawson, T Kouzarides - cell, 2012 - cell.com
The epigenetic regulation of DNA-templated processes has been intensely studied over the
last 15 years. DNA methylation, histone modification, nucleosome remodeling, and RNA …
last 15 years. DNA methylation, histone modification, nucleosome remodeling, and RNA …
[HTML][HTML] Beyond GWASs: illuminating the dark road from association to function
Genome-wide association studies (GWASs) have enabled the discovery of common genetic
variation contributing to normal and pathological traits and clinical drug responses, but …
variation contributing to normal and pathological traits and clinical drug responses, but …
[HTML][HTML] A CRISPR-based approach for targeted DNA demethylation
X Xu, Y Tao, X Gao, L Zhang, X Li, W Zou, K Ruan… - Cell discovery, 2016 - nature.com
In mammalian cells, DNA methylation critically regulates gene expression and thus has
pivotal roles in myriad of physiological and pathological processes. Here we report a novel …
pivotal roles in myriad of physiological and pathological processes. Here we report a novel …
Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications
F Krueger, SR Andrews - bioinformatics, 2011 - academic.oup.com
A combination of bisulfite treatment of DNA and high-throughput sequencing (BS-Seq) can
capture a snapshot of a cell's epigenomic state by revealing its genome-wide cytosine …
capture a snapshot of a cell's epigenomic state by revealing its genome-wide cytosine …
DNA methylation methods: Global DNA methylation and methylomic analyses
S Li, TO Tollefsbol - Methods, 2021 - Elsevier
DNA methylation provides a pivotal layer of epigenetic regulation in eukaryotes that has
significant involvement for numerous biological processes in health and disease. The …
significant involvement for numerous biological processes in health and disease. The …