The DNA methyltransferase family: a versatile toolkit for epigenetic regulation
F Lyko - Nature Reviews Genetics, 2018 - nature.com
The DNA methyltransferase (DNMT) family comprises a conserved set of DNA-modifying
enzymes that have a central role in epigenetic gene regulation. Recent studies have shown …
enzymes that have a central role in epigenetic gene regulation. Recent studies have shown …
Dynamics of the epigenetic landscape during the maternal-to-zygotic transition
MA Eckersley-Maslin, C Alda-Catalinas… - … Reviews Molecular Cell …, 2018 - nature.com
A remarkable epigenetic remodelling process occurs shortly after fertilization, which restores
totipotency to the zygote. This involves global DNA demethylation, chromatin remodelling …
totipotency to the zygote. This involves global DNA demethylation, chromatin remodelling …
scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells
Parallel single-cell sequencing protocols represent powerful methods for investigating
regulatory relationships, including epigenome-transcriptome interactions. Here, we report a …
regulatory relationships, including epigenome-transcriptome interactions. Here, we report a …
Insights into epigenetic patterns in mammalian early embryos
R Xu, C Li, X Liu, S Gao - Protein & cell, 2021 - academic.oup.com
Mammalian fertilization begins with the fusion of two specialized gametes, followed by major
epigenetic remodeling leading to the formation of a totipotent embryo. During the …
epigenetic remodeling leading to the formation of a totipotent embryo. During the …
Multi-tissue DNA methylation age predictor in mouse
Background DNA methylation changes at a discrete set of sites in the human genome are
predictive of chronological and biological age. However, it is not known whether these …
predictive of chronological and biological age. However, it is not known whether these …
Joint profiling of DNA methylation and chromatin architecture in single cells
We report a molecular assay, Methyl-HiC, that can simultaneously capture the chromosome
conformation and DNA methylome in a cell. Methyl-HiC reveals coordinated DNA …
conformation and DNA methylome in a cell. Methyl-HiC reveals coordinated DNA …
Dietary restriction protects from age-associated DNA methylation and induces epigenetic reprogramming of lipid metabolism
Background Dietary restriction (DR), a reduction in food intake without malnutrition,
increases most aspects of health during aging and extends lifespan in diverse species …
increases most aspects of health during aging and extends lifespan in diverse species …
Remembering foods and foes: emerging principles of transcriptional memory
SSH Tehrani, A Kogan, P Mikulski… - Cell Death & …, 2023 - nature.com
Transcriptional memory is characterized by a primed cellular state, induced by an external
stimulus that results in an altered expression of primed genes upon re-exposure to the …
stimulus that results in an altered expression of primed genes upon re-exposure to the …
[PDF][PDF] Transcriptional heterogeneity in naive and primed human pluripotent stem cells at single-cell resolution
T Messmer, F von Meyenn, A Savino, F Santos… - Cell reports, 2019 - cell.com
Conventional human embryonic stem cells are considered to be primed pluripotent but can
be induced to enter a naive state. However, the transcriptional features associated with …
be induced to enter a naive state. However, the transcriptional features associated with …
Roles of TET and TDG in DNA demethylation in proliferating and non-proliferating immune cells
Background TET enzymes mediate DNA demethylation by oxidizing 5-methylcytosine (5mC)
in DNA to 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC), and 5-carboxylcytosine …
in DNA to 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC), and 5-carboxylcytosine …