Epigenetics of discordant monozygotic twins: implications for disease

JE Castillo-Fernandez, TD Spector, JT Bell - Genome medicine, 2014 - Springer
Monozygotic (MZ) twins share nearly all of their genetic variants and many similar
environments before and after birth. However, they can also show phenotypic discordance …

TGF-β induces global changes in DNA methylation during the epithelial-to-mesenchymal transition in ovarian cancer cells

H Cardenas, E Vieth, J Lee, M Segar, Y Liu… - Epigenetics, 2014 - Taylor & Francis
A key step in the process of metastasis is the epithelial-to-mesenchymal transition (EMT).
We hypothesized that epigenetic mechanisms play a key role in EMT and to test this …

Genomic and phenotypic insights from an atlas of genetic effects on DNA methylation

JL Min, G Hemani, E Hannon, KF Dekkers… - Nature …, 2021 - nature.com
Characterizing genetic influences on DNA methylation (DNAm) provides an opportunity to
understand mechanisms underpinning gene regulation and disease. In the present study …

A computational solution for bolstering reliability of epigenetic clocks: Implications for clinical trials and longitudinal tracking

AT Higgins-Chen, KL Thrush, Y Wang, CJ Minteer… - Nature aging, 2022 - nature.com
Epigenetic clocks are widely used aging biomarkers calculated from DNA methylation data,
but this data can be surprisingly unreliable. Here we show that technical noise produces …

Engineering triangular carbon quantum dots with unprecedented narrow bandwidth emission for multicolored LEDs

F Yuan, T Yuan, L Sui, Z Wang, Z Xi, Y Li, X Li… - Nature …, 2018 - nature.com
Carbon quantum dots (CQDs) have emerged as promising materials for optoelectronic
applications on account of carbon's intrinsic merits of high stability, low cost, and …

Critical evaluation of the Illumina MethylationEPIC BeadChip microarray for whole-genome DNA methylation profiling

R Pidsley, E Zotenko, TJ Peters, MG Lawrence… - Genome biology, 2016 - Springer
Background In recent years the Illumina HumanMethylation450 (HM450) BeadChip has
provided a user-friendly platform to profile DNA methylation in human samples. However …

Comprehensive characterization, annotation and innovative use of Infinium DNA methylation BeadChip probes

W Zhou, PW Laird, H Shen - Nucleic acids research, 2017 - academic.oup.com
Abstract Illumina Infinium DNA Methylation BeadChips represent the most widely used
genome-scale DNA methylation assays. Existing strategies for masking Infinium probes …

Systematic identification of genetic influences on methylation across the human life course

TR Gaunt, HA Shihab, G Hemani, JL Min, G Woodward… - Genome biology, 2016 - Springer
Background The influence of genetic variation on complex diseases is potentially mediated
through a range of highly dynamic epigenetic processes exhibiting temporal variation during …

Sensitive periods for the effect of childhood adversity on DNA methylation: results from a prospective, longitudinal study

EC Dunn, TW Soare, Y Zhu, AJ Simpkin… - Biological …, 2019 - Elsevier
Background Exposure to early-life adversity is known to predict DNA methylation (DNAm)
patterns that may be related to psychiatric risk. However, few studies have investigated …

Prenatal exposure to maternal smoking and offspring DNA methylation across the lifecourse: findings from the Avon Longitudinal Study of Parents and Children …

RC Richmond, AJ Simpkin, G Woodward… - Human molecular …, 2015 - academic.oup.com
Maternal smoking during pregnancy has been found to influence newborn DNA methylation
in genes involved in fundamental developmental processes. It is pertinent to understand the …