Regulation of transposable elements by DNA modifications

Ö Deniz, JM Frost, MR Branco - Nature Reviews Genetics, 2019 - nature.com
Maintenance of genome stability requires control over the expression of transposable
elements (TEs), whose activity can have substantial deleterious effects on the host …

DNA methylation: shared and divergent features across eukaryotes

RJ Schmitz, ZA Lewis, MG Goll - Trends in Genetics, 2019 - cell.com
Chemical modification of nucleotide bases in DNA provides one mechanism for conveying
information in addition to the genetic code. 5-methylcytosine (5mC) represents the most …

Epigenetics in teleost fish: From molecular mechanisms to physiological phenotypes

C Best, H Ikert, DJ Kostyniuk, PM Craig… - … and Physiology Part B …, 2018 - Elsevier
While the field of epigenetics is increasingly recognized to contribute to the emergence of
phenotypes in mammalian research models across different developmental and …

[HTML][HTML] Germinal center output is sustained by HELLS-dependent DNA-methylation-maintenance in B cells

C Cousu, E Mulot, A De Smet, S Formichetti… - Nature …, 2023 - nature.com
Abstract HELLS/LSH (Helicase, Lymphoid Specific) is a SNF2-like chromatin remodelling
protein involved in DNA methylation. Its loss-of-function in humans causes humoral …

The epigenetic alterations of endogenous retroelements in aging

M Cardelli - Mechanisms of ageing and development, 2018 - Elsevier
Endogenous retroelements, transposons that mobilize through RNA intermediates, include
some of the most abundant repetitive sequences of the human genome, such as Alu and …

Atf7ip and Setdb1 interaction orchestrates the hematopoietic stem and progenitor cell state with diverse lineage differentiation

J Wu, J Li, K Chen, G Liu, Y Zhou… - Proceedings of the …, 2023 - National Acad Sciences
Hematopoietic stem and progenitor cells (HSPCs) are a heterogeneous group of cells with
expansion, differentiation, and repopulation capacities. How HSPCs orchestrate the …

[HTML][HTML] DNA tumor virus regulation of host DNA methylation and its implications for immune evasion and oncogenesis

SK Kuss-Duerkop, JA Westrich, D Pyeon - Viruses, 2018 - mdpi.com
Viruses have evolved various mechanisms to evade host immunity and ensure efficient viral
replication and persistence. Several DNA tumor viruses modulate host DNA …

[HTML][HTML] Epigenetic compensation promotes liver regeneration

S Wang, C Zhang, D Hasson, A Desai, S SenBanerjee… - Developmental cell, 2019 - cell.com
Two major functions of the epigenome are to regulate gene expression and to suppress
transposons. It is unclear how these functions are balanced during physiological challenges …

[HTML][HTML] Chromatin states shaped by an epigenetic code confer regenerative potential to the mouse liver

C Zhang, F Macchi, E Magnani, KC Sadler - Nature communications, 2021 - nature.com
We hypothesized that the highly controlled pattern of gene expression that is essential for
liver regeneration is encoded by an epigenetic code set in quiescent hepatocytes. Here we …

Inorganic arsenic causes fatty liver and interacts with ethanol to cause alcoholic liver disease in zebrafish

K Bambino, C Zhang, C Austin… - Disease models & …, 2018 - journals.biologists.com
The rapid increase in fatty liver disease (FLD) incidence is attributed largely to genetic and
lifestyle factors; however, environmental toxicants are a frequently overlooked factor that can …