TETonic shift: biological roles of TET proteins in DNA demethylation and transcription
In many organisms, the methylation of cytosine in DNA has a key role in silencing'parasitic'
DNA elements, regulating transcription and establishing cellular identity. The recent …
DNA elements, regulating transcription and establishing cellular identity. The recent …
DNA methylation landscapes: provocative insights from epigenomics
MM Suzuki, A Bird - Nature reviews genetics, 2008 - nature.com
The genomes of many animals, plants and fungi are tagged by methylation of DNA cytosine.
To understand the biological significance of this epigenetic mark it is essential to know …
To understand the biological significance of this epigenetic mark it is essential to know …
The behaviour of 5-hydroxymethylcytosine in bisulfite sequencing
Background We recently showed that enzymes of the TET family convert 5-mC to 5-
hydroxymethylcytosine (5-hmC) in DNA. 5-hmC is present at high levels in embryonic stem …
hydroxymethylcytosine (5-hmC) in DNA. 5-hmC is present at high levels in embryonic stem …
Mitochondrial DNA: Epigenetics and environment
Maintenance of the mitochondrial genome is essential for proper cellular function. For this
purpose, mitochondrial DNA (mtDNA) needs to be faithfully replicated, transcribed …
purpose, mitochondrial DNA (mtDNA) needs to be faithfully replicated, transcribed …
Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana
X Zhang, YV Bernatavichute, S Cokus, M Pellegrini… - Genome biology, 2009 - Springer
Background Post-translational modifications of histones play important roles in maintaining
normal transcription patterns by directly or indirectly affecting the structural properties of the …
normal transcription patterns by directly or indirectly affecting the structural properties of the …
Targeted bisulfite sequencing reveals changes in DNA methylation associated with nuclear reprogramming
J Deng, R Shoemaker, B Xie, A Gore… - Nature …, 2009 - nature.com
Current DNA methylation assays are limited in the flexibility and efficiency of characterizing
a large number of genomic targets. We report a method to specifically capture an arbitrary …
a large number of genomic targets. We report a method to specifically capture an arbitrary …
DNA methylation in nonalcoholic fatty liver disease
J Hyun, Y Jung - International journal of molecular sciences, 2020 - mdpi.com
Nonalcoholic fatty liver disease (NAFLD) is a widespread hepatic disorder in the United
States and other Westernized countries. Nonalcoholic steatohepatitis (NASH), an advanced …
States and other Westernized countries. Nonalcoholic steatohepatitis (NASH), an advanced …
The current state of chromatin immunoprecipitation
P Collas - Molecular biotechnology, 2010 - Springer
The biological significance of interactions of nuclear proteins with DNA in the context of
gene expression, cell differentiation, or disease has immensely been enhanced by the …
gene expression, cell differentiation, or disease has immensely been enhanced by the …
Population-specificity of human DNA methylation
Background Ethnic differences in human DNA methylation have been shown for a number of
CpG sites, but the genome-wide patterns and extent of these differences are largely …
CpG sites, but the genome-wide patterns and extent of these differences are largely …