Transcriptomics and machine learning to advance schizophrenia genetics: a case-control study using post-mortem brain data

B Qi, S Boscenco, J Ramamurthy… - Computer Methods and …, 2022 - Elsevier
Abstract Background and Objective Alterations of the expression of a variety of genes have
been reported in patients with schizophrenia (SCZ). Moreover, machine learning (ML) …

Machine learning in schizophrenia genomics, a case‐control study using 5,090 exomes

YJ Trakadis, S Sardaar, A Chen… - American Journal of …, 2019 - Wiley Online Library
Our hypothesis is that machine learning (ML) analysis of whole exome sequencing (WES)
data can be used to identify individuals at high risk for schizophrenia (SCZ). This study …

Identifying novel proteins underlying schizophrenia via integrating pQTLs of the plasma, CSF, and brain with GWAS summary data

X Gu, M Dou, W Su, Z Jiang, Q Duan, B Cao, Y Chen - BMC medicine, 2022 - Springer
Background Schizophrenia (SCZ) is a chronic and severe mental illness with no cure so far.
Mendelian randomization (MR) is a genetic method widely used to explore etiologies of …

A core collection of pan-schizophrenia genes allows building cohort-specific signatures of affected brain

Q Xie, WW Shen, Z Li, A Baranova, H Cao, Z Li - Scientific Reports, 2019 - nature.com
To investigate whether pan-schizophrenia genes could be leveraged for building cohort-
specific signatures reflecting the functioning of the affected brain, we first collected 1,518 …

Identification of the gene signature reflecting schizophrenia's etiology by constructing artificial intelligence‐based method of enhanced reproducibility

QX Yang, YX Wang, FC Li, S Zhang… - CNS Neuroscience …, 2019 - Wiley Online Library
Aims As one of the most fundamental questions in modern science,“what causes
schizophrenia (SZ)” remains a profound mystery due to the absence of objective gene …

Genome-wide expression profiling of schizophrenia using a large combined cohort

M Mistry, J Gillis, P Pavlidis - Molecular psychiatry, 2013 - nature.com
Numerous studies have examined gene expression profiles in post-mortem human brain
samples from individuals with schizophrenia compared with healthy controls, to gain insight …

Correlated expression analysis of genes implicated in schizophrenia: identification of putative disease-related pathways

EI Liedtke, S Zhang, JA Thompson, S Sillau… - New horizons in …, 2017 - Elsevier
Schizophrenia (SCZ) is a severe psychiatric disorder affecting 0.7% of the population [1].
When inadequately treated, subjects with SCZ experience symptoms that render them …

Identification of schizophrenia symptom-related gene modules by postmortem brain transcriptome analysis

K Miyahara, M Hino, R Shishido, A Nagaoka… - Translational …, 2023 - nature.com
Schizophrenia is a multifactorial disorder, the genetic architecture of which remains unclear.
Although many studies have examined the etiology of schizophrenia, the gene sets that …

Integrative omics of schizophrenia: from genetic determinants to clinical classification and risk prediction

F Guan, T Ni, W Zhu, LK Williams, LB Cui, M Li… - Molecular …, 2022 - nature.com
Schizophrenia (SCZ) is a debilitating neuropsychiatric disorder with high heritability and
complex inheritance. In the past decade, successful identification of numerous susceptibility …

Proteomic analysis of lymphoblastoid cell lines from schizophrenic patients

A Yoshimi, S Yamada, S Kunimoto, B Aleksic… - Translational …, 2019 - nature.com
Although a number of studies have identified several convincing candidate genes or
molecules, the pathophysiology of schizophrenia (SCZ) has not been completely elucidated …