Developmental features of DNA methylation during activation of the embryonic zebrafish genome

IS Andersen, AH Reiner, H Aanes, P Aleström, P Collas - Genome biology, 2012 - Springer
Background Zygotic genome activation (ZGA) occurs at the mid-blastula transition (MBT) in
zebrafish and is a period of extensive chromatin remodeling. Genome-scale gametic …

[HTML][HTML] Genome-wide epigenetic cross-talk between DNA methylation and H3K27me3 in zebrafish embryos

E de la Calle Mustienes, JL Gómez-Skarmeta… - Genomics data, 2015 - Elsevier
DNA methylation and histone modifications are epigenetic marks implicated in the complex
regulation of vertebrate embryogenesis. The cross-talk between DNA methylation and …

Large hypomethylated domains serve as strong repressive machinery for key developmental genes in vertebrates

R Nakamura, T Tsukahara, W Qu, K Ichikawa… - …, 2014 - journals.biologists.com
DNA methylation is a fundamental epigenetic modification in vertebrate genomes and a
small fraction of genomic regions is hypomethylated. Previous studies have implicated …

Reprogramming histone modification patterns to coordinate gene expression in early zebrafish embryos

W Zhu, X Xu, X Wang, J Liu - BMC genomics, 2019 - Springer
Background Multicellular organisms require precise gene regulation during ontogeny, and
epigenetic modifications, such as DNA methylation and histone modification, facilitate this …

Developmental enhancers revealed by extensive DNA methylome maps of zebrafish early embryos

HJ Lee, RF Lowdon, B Maricque, B Zhang… - Nature …, 2015 - nature.com
DNA methylation undergoes dynamic changes during development and cell differentiation.
Recent genome-wide studies discovered that tissue-specific differentially methylated …

[HTML][HTML] Reprogramming the maternal zebrafish genome after fertilization to match the paternal methylation pattern

ME Potok, DA Nix, TJ Parnell, BR Cairns - Cell, 2013 - cell.com
Early vertebrate embryos must achieve totipotency and prepare for zygotic genome
activation (ZGA). To understand this process, we determined the DNA methylation (DNAme) …

Inherited DNA methylation primes the establishment of accessible chromatin during genome activation

G Liu, W Wang, S Hu, X Wang, Y Zhang - Genome Research, 2018 - genome.cshlp.org
For animals, epigenetic modifications can be globally or partially inherited from gametes
after fertilization, and such information is required for proper transcriptional regulation …

Variant Histone H2afv reprograms DNA methylation during early zebrafish development

B Madakashira, L Corbett, C Zhang, P Paoli… - Epigenetics, 2017 - Taylor & Francis
The DNA methylome is re-patterned during discrete phases of vertebrate development. In
zebrafish, there are 2 waves of global DNA demethylation and re-methylation: the first …

Evolutionary conservation of embryonic DNA methylome remodelling in distantly related teleost species

SE Ross, J Vázquez-Marín, KRB Gert… - Nucleic Acids …, 2023 - academic.oup.com
Methylation of cytosines in the CG context (mCG) is the most abundant DNA modification in
vertebrates that plays crucial roles in cellular differentiation and identity. After fertilization …

[HTML][HTML] Sperm, but not oocyte, DNA methylome is inherited by zebrafish early embryos

L Jiang, J Zhang, JJ Wang, L Wang, L Zhang, G Li… - Cell, 2013 - cell.com
methylcytosine is a major epigenetic modification that is sometimes called" the fifth
nucleotide." However, our knowledge of how offspring inherit the DNA methylome from …