DNA methylation dynamics during early plant life
D Bouyer, A Kramdi, M Kassam, M Heese, A Schnittger… - Genome biology, 2017 - Springer
Background Cytosine methylation is crucial for gene regulation and silencing of
transposable elements in mammals and plants. While this epigenetic mark is extensively …
transposable elements in mammals and plants. While this epigenetic mark is extensively …
Genome-wide high-resolution mapping and functional analysis of DNA methylation in Arabidopsis
Cytosine methylation is important for transposon silencing and epigenetic regulation of
endogenous genes, although the extent to which this DNA modification functions to regulate …
endogenous genes, although the extent to which this DNA modification functions to regulate …
Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription
D Zilberman, M Gehring, RK Tran, T Ballinger… - Nature …, 2007 - nature.com
Cytosine methylation, a common form of DNA modification that antagonizes transcription, is
found at transposons and repeats in vertebrates, plants and fungi. Here we have mapped …
found at transposons and repeats in vertebrates, plants and fungi. Here we have mapped …
Local DNA hypomethylation activates genes in rice endosperm
Cytosine methylation silences transposable elements in plants, vertebrates, and fungi but
also regulates gene expression. Plant methylation is catalyzed by three families of enzymes …
also regulates gene expression. Plant methylation is catalyzed by three families of enzymes …
Dynamic DNA methylation reconfiguration during seed development and germination
Background Unlike animals, plants can pause their life cycle as dormant seeds. In both
plants and animals, DNA methylation is involved in the regulation of gene expression and …
plants and animals, DNA methylation is involved in the regulation of gene expression and …
Evolutionary patterns of genic DNA methylation vary across land plants
Little is known about patterns of genic DNA methylation across the plant kingdom or about
the evolutionary processes that shape them. To characterize gene-body methylation (gbM) …
the evolutionary processes that shape them. To characterize gene-body methylation (gbM) …
Dynamic DNA methylation in plant growth and development
A Bartels, Q Han, P Nair, L Stacey, H Gaynier… - International journal of …, 2018 - mdpi.com
DNA methylation is an epigenetic modification required for transposable element (TE)
silencing, genome stability, and genomic imprinting. Although DNA methylation has been …
silencing, genome stability, and genomic imprinting. Although DNA methylation has been …
Chromatin and siRNA pathways cooperate to maintain DNA methylation of small transposable elements in Arabidopsis
RK Tran, D Zilberman, C de Bustos, RF Ditt… - Genome biology, 2005 - Springer
Background DNA methylation occurs at preferred sites in eukaryotes. In Arabidopsis, DNA
cytosine methylation is maintained by three subfamilies of methyltransferases with distinct …
cytosine methylation is maintained by three subfamilies of methyltransferases with distinct …
DNA methylation underpins the epigenomic landscape regulating genome transcription in Arabidopsis
L Zhao, Q Zhou, L He, L Deng, R Lozano-Duran, G Li… - Genome biology, 2022 - Springer
Background It is challenging to determine the effect of DNA methylation on the epigenetic
landscape and the function in higher organisms due to the lack of DNA methylation-free …
landscape and the function in higher organisms due to the lack of DNA methylation-free …
Pathway conversion enables a double-lock mechanism to maintain DNA methylation and genome stability
L He, C Zhao, Q Zhang, G Zinta… - Proceedings of the …, 2021 - National Acad Sciences
The CMT2 and RNA-directed DNA methylation (RdDM) pathways have been proposed to
separately maintain CHH methylation in specific regions of the Arabidopsis thaliana …
separately maintain CHH methylation in specific regions of the Arabidopsis thaliana …