Mapping the tumour human leukocyte antigen (HLA) ligandome by mass spectrometry

LK Freudenmann, A Marcu, S Stevanović - Immunology, 2018 - Wiley Online Library
The entirety of human leukocyte antigen (HLA)‐presented peptides is referred to as the HLA
ligandome of a cell or tissue, in tumours often termed immunopeptidome. Mapping the …

[HTML][HTML] Current perspectives on mass spectrometry-based immunopeptidomics: the computational angle to tumor antigen discovery

B Zhang, M Bassani-Sternberg - Journal for Immunotherapy of …, 2023 - ncbi.nlm.nih.gov
Identification of tumor antigens presented by the human leucocyte antigen (HLA) molecules
is essential for the design of effective and safe cancer immunotherapies that rely on T cell …

Mass spectrometry based immunopeptidomics leads to robust predictions of phosphorylated HLA class I ligands

M Solleder, P Guillaume, J Racle, J Michaux… - Molecular & Cellular …, 2020 - ASBMB
The presentation of peptides on class I human leukocyte antigen (HLA-I) molecules plays a
central role in immune recognition of infected or malignant cells. In cancer, non-self HLA-I …

Pitfalls in HLA ligandomics—how to catch a li (e) gand

J Fritsche, DJ Kowalewski, L Backert, F Gwinner… - Molecular & Cellular …, 2021 - ASBMB
Abstract Knowledge about the peptide repertoire presented by human leukocyte antigens
(HLA) holds the key to unlock target-specific cancer immunotherapies such as adoptive cell …

The importance of being presented: target validation by immunopeptidomics for epitope-specific immunotherapies

JP Becker, AB Riemer - Frontiers in Immunology, 2022 - frontiersin.org
Presentation of tumor-specific or tumor-associated peptides by HLA class I molecules to
CD8+ T cells is the foundation of epitope-centric cancer immunotherapies. While often in …

[HTML][HTML] Defining HLA-II ligand processing and binding rules with mass spectrometry enhances cancer epitope prediction

JG Abelin, D Harjanto, M Malloy, P Suri, T Colson… - Immunity, 2019 - cell.com
Increasing evidence indicates CD4+ T cells can recognize cancer-specific antigens and
control tumor growth. However, it remains difficult to predict the antigens that will be …

Translating immunopeptidomics to immunotherapy‐decision‐making for patient and personalized target selection

J Fritsche, B Rakitsch, F Hoffgaard, M Römer… - …, 2018 - Wiley Online Library
Immunotherapy is revolutionizing cancer treatment and has shown success in particular for
tumors with a high mutational load. These effects have been linked to neoantigens derived …

The role of mass spectrometry and proteogenomics in the advancement of HLA epitope prediction

AL Creech, YS Ting, SP Goulding, JFK Sauld… - …, 2018 - Wiley Online Library
A challenge in developing personalized cancer immunotherapies is the prediction of
putative cancer‐specific antigens. Currently, predictive algorithms are used to infer binding …

Sensitive, high-throughput HLA-I and HLA-II immunopeptidomics using parallel accumulation-serial fragmentation mass spectrometry

KM Phulphagar, C Ctortecka, ASV Jacome… - Molecular & Cellular …, 2023 - ASBMB
Comprehensive and in-depth identification of the human leukocyte antigen class I (HLA-I)
and class II (HLA-II) tumor immunopeptidome can inform the development of cancer …

[HTML][HTML] Application of mass spectrometry-based MHC immunopeptidome profiling in neoantigen identification for tumor immunotherapy

X Zhang, Y Qi, Q Zhang, W Liu - Biomedicine & Pharmacotherapy, 2019 - Elsevier
One of the challenges for cancer vaccine and adoptive T-cell-based immunotherapy is to
identify the major histocompatibility complex (MHC)-associated non-self neoantigens …