Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer

JH Kim, SM Dhanasekaran, JR Prensner… - Genome …, 2011 - genome.cshlp.org
Beginning with precursor lesions, aberrant DNA methylation marks the entire spectrum of
prostate cancer progression. We mapped the global DNA methylation patterns in select …

DNA methylation profiling reveals novel biomarkers and important roles for DNA methyltransferases in prostate cancer

Y Kobayashi, DM Absher, ZG Gulzar… - Genome …, 2011 - genome.cshlp.org
Candidate gene-based studies have identified a handful of aberrant CpG DNA methylation
events in prostate cancer. However, DNA methylation profiles have not been compared on a …

[HTML][HTML] Whole-genome methylation sequencing reveals distinct impact of differential methylations on gene transcription in prostate cancer

PY Yan, Y Ding, R Chen, SG Liao, BG Ren… - The American journal of …, 2013 - Elsevier
DNA methylation is one of the most important epigenetic mechanisms in regulating gene
expression. Genome hypermethylation has been proposed as a critical mechanism in …

Epigenomic profiling of DNA methylation in paired prostate cancer versus adjacent benign tissue

MS Geybels, S Zhao, CJ Wong, M Bibikova… - The …, 2015 - Wiley Online Library
Background Aberrant DNA methylation may promote prostate carcinogenesis. We
investigated epigenome‐wide DNA methylation profiles in prostate cancer (PCa) compared …

[HTML][HTML] Methylome-wide sequencing detects DNA hypermethylation distinguishing indolent from aggressive prostate cancer

JM Bhasin, BH Lee, L Matkin, MG Taylor, B Hu, Y Xu… - Cell reports, 2015 - cell.com
A critical need in understanding the biology of prostate cancer is characterizing the
molecular differences between indolent and aggressive cases. Because DNA methylation …

[HTML][HTML] Genome-wide DNA methylation measurements in prostate tissues uncovers novel prostate cancer diagnostic biomarkers and transcription factor binding …

MK Kirby, RC Ramaker, BS Roberts, BN Lasseigne… - BMC cancer, 2017 - Springer
Background Current diagnostic tools for prostate cancer lack specificity and sensitivity for
detecting very early lesions. DNA methylation is a stable genomic modification that is …

Epigenomic alterations in localized and advanced prostate cancer

PC Lin, EG Giannopoulou, K Park, JM Mosquera… - Neoplasia, 2013 - Elsevier
Although prostate cancer (PCa) is the second leading cause of cancer death among men
worldwide, not all men diagnosed with PCa will die from the disease. A critical challenge …

[HTML][HTML] Identification of key DNA methylation-driven genes in prostate adenocarcinoma: an integrative analysis of TCGA methylation data

N Xu, YP Wu, ZB Ke, YC Liang, H Cai, WT Su… - Journal of Translational …, 2019 - Springer
Abstract Background Prostate cancer (PCa) remains the second leading cause of deaths
due to cancer in the United States in men. The aim of this study was to perform an integrative …

Comparison of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal …

SS Nair, MW Coolen, C Stirzaker, JZ Song… - Epigenetics, 2011 - Taylor & Francis
DNA methylation primarily occurs at CpG dinucleotides in mammals and is a common
epigenetic mark that plays a critical role in the regulation of gene expression. Profiling DNA …

[HTML][HTML] Identification of new differentially methylated genes that have potential functional consequences in prostate cancer

JW Kim, ST Kim, AR Turner, T Young, S Smith, W Liu… - PloS one, 2012 - journals.plos.org
Many differentially methylated genes have been identified in prostate cancer (PCa),
primarily using candidate gene-based assays. Recently, several global DNA methylation …