Decoding the function of bivalent chromatin in development and cancer

D Kumar, S Cinghu, AJ Oldfield, P Yang… - Genome …, 2021 - genome.cshlp.org
Bivalent chromatin is characterized by the simultaneous presence of H3K4me3 and
H3K27me3, histone modifications generally associated with transcriptionally active and …

Changes of bivalent chromatin coincide with increased expression of developmental genes in cancer

SH Bernhart, H Kretzmer, LM Holdt, F Jühling… - Scientific reports, 2016 - nature.com
Bivalent (poised or paused) chromatin comprises activating and repressing histone
modifications at the same location. This combination of epigenetic marks at promoter or …

Bivalent histone modifications and development

F Li, M Wan, B Zhang, Y Peng, Y Zhou… - Current stem cell …, 2018 - ingentaconnect.com
Background: Development is an epigenetic regulation dependent event. As one
pretranscriptional regulator, bivalent histone modifications were observed to be involved in …

The bivalent genome: characterization, structure, and regulation

E Blanco, M González-Ramírez, A Alcaine-Colet… - Trends in Genetics, 2020 - cell.com
An intricate molecular machinery is at the core of gene expression regulation in every cell.
During the initial stages of organismal development, the coordinated activation of diverse …

H3K36 dimethylation shapes the epigenetic interaction landscape by directing repressive chromatin modifications in embryonic stem cells

H Chen, B Hu, C Horth, E Bareke… - Genome …, 2022 - genome.cshlp.org
Epigenetic modifications on the chromatin do not occur in isolation. Chromatin-associated
proteins and their modification products form a highly interconnected network, and …

Redundant mechanisms to form silent chromatin at pericentromeric regions rely on BEND3 and DNA methylation

N Saksouk, TK Barth, C Ziegler-Birling, N Olova… - Molecular cell, 2014 - cell.com
Constitutive heterochromatin is typically defined by high levels of DNA methylation and H3
lysine 9 trimethylation (H3K9Me3), whereas facultative heterochromatin displays DNA …

Coordinate regulation of DNA methylation and H3K27me3 in mouse embryonic stem cells

JA Hagarman, MP Motley, K Kristjansdottir… - PloS one, 2013 - journals.plos.org
Chromatin is separated into functional domains distinguished by combinatorial patterns of
post-translational histone modifications and DNA methylation. Recent studies examining …

A DNA hypermethylation module for the stem/progenitor cell signature of cancer

H Easwaran, SE Johnstone, L Van Neste… - Genome …, 2012 - genome.cshlp.org
Many DNA-hypermethylated cancer genes are occupied by the Polycomb (PcG) repressor
complex in embryonic stem cells (ESCs). Their prevalence in the full spectrum of cancers …

Genomic and proteomic resolution of heterochromatin and its restriction of alternate fate genes

JS Becker, RL McCarthy, S Sidoli, G Donahue… - Molecular cell, 2017 - cell.com
Heterochromatin is integral to cell identity maintenance by impeding the activation of genes
for alternate cell fates. Heterochromatic regions are associated with histone 3 lysine 9 …

Regulation, functions and transmission of bivalent chromatin during mammalian development

TA Macrae, J Fothergill-Robinson… - … reviews Molecular cell …, 2023 - nature.com
Cells differentiate and progress through development guided by a dynamic chromatin
landscape that mediates gene expression programmes. During development, mammalian …