Intragenic DNA methylation prevents spurious transcription initiation

F Neri, S Rapelli, A Krepelova, D Incarnato, C Parlato… - Nature, 2017 - nature.com
In mammals, DNA methylation occurs mainly at CpG dinucleotides. Methylation of the
promoter suppresses gene expression, but the functional role of gene-body DNA …

The histone mark H3K36me2 recruits DNMT3A and shapes the intergenic DNA methylation landscape

DN Weinberg, S Papillon-Cavanagh, H Chen, Y Yue… - Nature, 2019 - nature.com
Enzymes that catalyse CpG methylation in DNA, including the DNA methyltransferases 1
(DNMT1), 3A (DNMT3A) and 3B (DNMT3B), are indispensable for mammalian tissue …

TETs compete with DNMT3 activity in pluripotent cells at thousands of methylated somatic enhancers

J Charlton, EJ Jung, AL Mattei, N Bailly, J Liao… - Nature …, 2020 - nature.com
Mammalian cells stably maintain high levels of DNA methylation despite expressing both
positive (DNMT3A/B) and negative (TET1-3) regulators. Here, we analyzed the independent …

Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation

T Baubec, DF Colombo, C Wirbelauer, J Schmidt… - Nature, 2015 - nature.com
DNA methylation is an epigenetic modification associated with transcriptional repression of
promoters and is essential for mammalian development. Establishment of DNA methylation …

DNMT1-interacting RNAs block gene-specific DNA methylation

A Di Ruscio, AK Ebralidze, T Benoukraf, G Amabile… - Nature, 2013 - nature.com
DNA methylation was first described almost a century ago; however, the rules governing its
establishment and maintenance remain elusive. Here we present data demonstrating that …

Targets and dynamics of promoter DNA methylation during early mouse development

J Borgel, S Guibert, Y Li, H Chiba, D Schübeler… - Nature …, 2010 - nature.com
DNA methylation is extensively reprogrammed during the early phases of mammalian
development, yet genomic targets of this process are largely unknown. We optimized …

Dnmt3a-dependent nonpromoter DNA methylation facilitates transcription of neurogenic genes

H Wu, V Coskun, J Tao, W Xie, W Ge, K Yoshikawa… - science, 2010 - science.org
DNA methylation at proximal promoters facilitates lineage restriction by silencing cell type–
specific genes. However, euchromatic DNA methylation frequently occurs in regions outside …

Genome-wide analysis in the mouse embryo reveals the importance of DNA methylation for transcription integrity

T Dahlet, A Argüeso Lleida, H Al Adhami… - Nature …, 2020 - nature.com
Mouse embryos acquire global DNA methylation of their genome during implantation.
However the exact roles of DNA methyltransferases (DNMTs) in embryos have not been …

Distinct roles of DNMT1-dependent and DNMT1-independent methylation patterns in the genome of mouse embryonic stem cells

Z Li, H Dai, SN Martos, B Xu, Y Gao, T Li, G Zhu… - Genome biology, 2015 - Springer
Background DNA methylation patterns are initiated by de novo DNA methyltransferases
DNMT3a/3b adding methyl groups to CG dinucleotides in the hypomethylated genome of …

DNMT3A and TET1 cooperate to regulate promoter epigenetic landscapes in mouse embryonic stem cells

T Gu, X Lin, SM Cullen, M Luo, M Jeong, M Estecio… - Genome biology, 2018 - Springer
Background DNA methylation is a heritable epigenetic mark, enabling stable but reversible
gene repression. In mammalian cells, DNA methyltransferases (DNMTs) are responsible for …