Reactome array: forging a link between metabolome and genome
A Beloqui, ME Guazzaroni, F Pazos, JM Vieites… - Science, 2009 - science.org
We describe a sensitive metabolite array for genome sequence–independent functional
analysis of metabolic phenotypes and networks, the reactomes, of cell populations and …
analysis of metabolic phenotypes and networks, the reactomes, of cell populations and …
Comparative metagenomics of microbial communities
The species complexity of microbial communities and challenges in culturing representative
isolates make it difficult to obtain assembled genomes. Here we characterize and compare …
isolates make it difficult to obtain assembled genomes. Here we characterize and compare …
Addressing reproducibility in single-laboratory phenotyping experiments
To demonstrate metabolic pathway analysis and multiomic integration, we describe
representative sample sets in the Supplementary Note, including metabolic pathway …
representative sample sets in the Supplementary Note, including metabolic pathway …
Metabolomics and mass spectrometry imaging reveal channeled de novo purine synthesis in cells
Metabolons, multiprotein complexes consisting of sequential enzymes of a metabolic
pathway, are proposed to be biosynthetic “hotspots” within the cell. However, experimental …
pathway, are proposed to be biosynthetic “hotspots” within the cell. However, experimental …
MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks
L Cottret, D Wildridge, F Vinson, MP Barrett… - Nucleic acids …, 2010 - academic.oup.com
High-throughput metabolomic experiments aim at identifying and ultimately quantifying all
metabolites present in biological systems. The metabolites are interconnected through …
metabolites present in biological systems. The metabolites are interconnected through …
Integrated genomic and proteomic analyses of a systematically perturbed metabolic network
We demonstrate an integrated approach to build, test, and refine a model of a cellular
pathway, in which perturbations to critical pathway components are analyzed using DNA …
pathway, in which perturbations to critical pathway components are analyzed using DNA …
Metabolic profiling on the right path
In the post-genomics era, high-throughput techniques for monitoring RNA1 and protein2
levels are well on their way to becoming mainstream tools for monitoring global cell …
levels are well on their way to becoming mainstream tools for monitoring global cell …
Impact of genome reduction on bacterial metabolism and its regulation
E Yus, T Maier, K Michalodimitrakis, V van Noort… - science, 2009 - science.org
To understand basic principles of bacterial metabolism organization and regulation, but also
the impact of genome size, we systematically studied one of the smallest bacteria …
the impact of genome size, we systematically studied one of the smallest bacteria …
Single-cell metabolomics hits its stride
C Seydel - Nature methods, 2021 - nature.com
Single-cell metabolomics hits its stride | Nature Methods Skip to main content Thank you for
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visiting nature.com. You are using a browser version with limited support for CSS. To obtain the …
Chemical approaches to study metabolic networks
D Medina-Cleghorn, DK Nomura - Pflügers Archiv-European Journal of …, 2013 - Springer
One of the more provocative realizations that have come out of the genome sequencing
projects is that organisms possess a large number of uncharacterized or poorly …
projects is that organisms possess a large number of uncharacterized or poorly …