Multi‐locus species delimitation in closely related animals and fungi: one marker is not enough
Despite taxonomy's 250‐year history, the past 20 years have borne witness to remarkable
advances in technology and techniques, as well as debate. DNA barcoding has generated a …
advances in technology and techniques, as well as debate. DNA barcoding has generated a …
Species detection and individual assignment in species delimitation: can integrative data increase efficacy?
DL Edwards, LL Knowles - Proceedings of the Royal …, 2014 - royalsocietypublishing.org
Statistical species delimitation usually relies on singular data, primarily genetic, for detecting
putative species and individual assignment to putative species. Given the variety of …
putative species and individual assignment to putative species. Given the variety of …
GenBank is a reliable resource for 21st century biodiversity research
M Leray, N Knowlton, SL Ho… - Proceedings of the …, 2019 - National Acad Sciences
Traditional methods of characterizing biodiversity are increasingly being supplemented and
replaced by approaches based on DNA sequencing alone. These approaches commonly …
replaced by approaches based on DNA sequencing alone. These approaches commonly …
DNA barcoding and taxonomy in Diptera: a tale of high intraspecific variability and low identification success
DNA barcoding and DNA taxonomy have recently been proposed as solutions to the crisis of
taxonomy and received significant attention from scientific journals, grant agencies, natural …
taxonomy and received significant attention from scientific journals, grant agencies, natural …
The hitchhiker's guide to single‐locus species delimitation
S Dellicour, JF Flot - Molecular Ecology Resources, 2018 - Wiley Online Library
Molecular approaches to species delimitation are increasingly used to ascertain the number
of species in a sample prior to taxonomic, ecological or physiological studies. Although …
of species in a sample prior to taxonomic, ecological or physiological studies. Although …
How to fail at species delimitation
Species delimitation is the act of identifying species‐level biological diversity. In recent
years, the field has witnessed a dramatic increase in the number of methods available for …
years, the field has witnessed a dramatic increase in the number of methods available for …
Between two extremes: mitochondrial DNA is neither the panacea nor the nemesis of phylogenetic and taxonomic inference
D Rubinoff, BS Holland - Systematic biology, 2005 - academic.oup.com
Recently, the role of mitochondrial DNA (mtDNA) sequences in taxonomy and phylogenetic
inference has become contentious, and two extreme viewpoints have emerged, although, as …
inference has become contentious, and two extreme viewpoints have emerged, although, as …
Species delimitation using dominant and codominant multilocus markers
B Hausdorf, C Hennig - Systematic Biology, 2010 - academic.oup.com
We propose a method for delimiting species based on dominant or codominant multilocus
data using Gaussian clustering with a noise component for outliers. Case studies show that …
data using Gaussian clustering with a noise component for outliers. Case studies show that …
DNA-based species delineation in tropical beetles using mitochondrial and nuclear markers
MT Monaghan, M Balke… - … Transactions of the …, 2005 - royalsocietypublishing.org
DNA barcoding has been successfully implemented in the identification of previously
described species, and in the process has revealed several cryptic species. It has been …
described species, and in the process has revealed several cryptic species. It has been …
A genomic perspective on the shortcomings of mitochondrial DNA for “barcoding” identification
Approximately 600-bp sequences of mitochondrial DNA (mtDNA) have been designated as
“DNA barcodes” and have become one of the most contentious and animated issues in the …
“DNA barcodes” and have become one of the most contentious and animated issues in the …