Multi‐locus species delimitation in closely related animals and fungi: one marker is not enough

JR Dupuis, AD Roe, FAH Sperling - Molecular ecology, 2012 - Wiley Online Library
Despite taxonomy's 250‐year history, the past 20 years have borne witness to remarkable
advances in technology and techniques, as well as debate. DNA barcoding has generated a …

Species detection and individual assignment in species delimitation: can integrative data increase efficacy?

DL Edwards, LL Knowles - Proceedings of the Royal …, 2014 - royalsocietypublishing.org
Statistical species delimitation usually relies on singular data, primarily genetic, for detecting
putative species and individual assignment to putative species. Given the variety of …

GenBank is a reliable resource for 21st century biodiversity research

M Leray, N Knowlton, SL Ho… - Proceedings of the …, 2019 - National Acad Sciences
Traditional methods of characterizing biodiversity are increasingly being supplemented and
replaced by approaches based on DNA sequencing alone. These approaches commonly …

DNA barcoding and taxonomy in Diptera: a tale of high intraspecific variability and low identification success

R Meier, K Shiyang, G Vaidya, PKL Ng - Systematic biology, 2006 - academic.oup.com
DNA barcoding and DNA taxonomy have recently been proposed as solutions to the crisis of
taxonomy and received significant attention from scientific journals, grant agencies, natural …

The hitchhiker's guide to single‐locus species delimitation

S Dellicour, JF Flot - Molecular Ecology Resources, 2018 - Wiley Online Library
Molecular approaches to species delimitation are increasingly used to ascertain the number
of species in a sample prior to taxonomic, ecological or physiological studies. Although …

How to fail at species delimitation

BC Carstens, TA Pelletier, NM Reid… - Molecular ecology, 2013 - Wiley Online Library
Species delimitation is the act of identifying species‐level biological diversity. In recent
years, the field has witnessed a dramatic increase in the number of methods available for …

Between two extremes: mitochondrial DNA is neither the panacea nor the nemesis of phylogenetic and taxonomic inference

D Rubinoff, BS Holland - Systematic biology, 2005 - academic.oup.com
Recently, the role of mitochondrial DNA (mtDNA) sequences in taxonomy and phylogenetic
inference has become contentious, and two extreme viewpoints have emerged, although, as …

Species delimitation using dominant and codominant multilocus markers

B Hausdorf, C Hennig - Systematic Biology, 2010 - academic.oup.com
We propose a method for delimiting species based on dominant or codominant multilocus
data using Gaussian clustering with a noise component for outliers. Case studies show that …

DNA-based species delineation in tropical beetles using mitochondrial and nuclear markers

MT Monaghan, M Balke… - … Transactions of the …, 2005 - royalsocietypublishing.org
DNA barcoding has been successfully implemented in the identification of previously
described species, and in the process has revealed several cryptic species. It has been …

A genomic perspective on the shortcomings of mitochondrial DNA for “barcoding” identification

D Rubinoff, S Cameron, K Will - Journal of heredity, 2006 - academic.oup.com
Approximately 600-bp sequences of mitochondrial DNA (mtDNA) have been designated as
“DNA barcodes” and have become one of the most contentious and animated issues in the …