Differential gene expression in HIV-infected individuals following ART
M Massanella, A Singhania, N Beliakova-Bethell… - Antiviral research, 2013 - Elsevier
Previous studies of the effect of ART on gene expression in HIV-infected individuals have
identified small numbers of modulated genes. Since these studies were underpowered or …
identified small numbers of modulated genes. Since these studies were underpowered or …
[HTML][HTML] Genome-wide analysis of primary peripheral blood mononuclear cells from HIV+ patients-pre-and post-HAART show immune activation and inflammation the …
Background Although the host gene expression in the context of HIV has been explored by
several studies, it remains unclear how HIV is able to manipulate and subvert host gene …
several studies, it remains unclear how HIV is able to manipulate and subvert host gene …
Antiretroviral therapy concentrations differ in gut vs. lymph node tissues and are associated with HIV viral transcription by a novel RT-ddPCR assay
SA Lee, S Telwatte, H Hatano… - JAIDS Journal of …, 2020 - journals.lww.com
Background: Most HIV-infected cells during antiretroviral therapy (ART) persist in lymphoid
tissues. Studies disagree on whether suboptimal tissue ART concentrations contribute to …
tissues. Studies disagree on whether suboptimal tissue ART concentrations contribute to …
[HTML][HTML] Identification of genes whose expression profile is associated with non-progression towards AIDS using eQTLs
JL Spadoni, P Rucart, S Le Clerc, D van Manen… - PLoS …, 2015 - journals.plos.org
Background Many genome-wide association studies have been performed on progression
towards the acquired immune deficiency syndrome (AIDS) and they mainly identified …
towards the acquired immune deficiency syndrome (AIDS) and they mainly identified …
Antiretroviral therapy down-regulates innate antiviral response genes in patients with AIDS in sub-saharan Africa
DR Boulware, DB Meya, TL Bergemann… - JAIDS Journal of …, 2010 - journals.lww.com
Objective: HIV pathogenesis is characterized by destructive imbalances between virus-
mediated immune damage, antiviral immune responses, and immune activation. We …
mediated immune damage, antiviral immune responses, and immune activation. We …
[HTML][HTML] Adaptation of droplet digital PCR-based HIV transcription profiling to digital PCR and association of HIV transcription and total or intact HIV DNA
C Tumpach, A Rhodes, Y Kim, J Ong, H Liu, D Chibo… - Viruses, 2023 - mdpi.com
In most people living with HIV (PLWH) on effective antiretroviral therapy (ART), cell-
associated viral transcripts are readily detectable in CD4+ T cells despite the absence of …
associated viral transcripts are readily detectable in CD4+ T cells despite the absence of …
[HTML][HTML] Transcriptional profiles in CD8+ T cells from HIV+ progressors on HAART are characterized by coordinated up-regulation of oxidative phosphorylation …
The functional impairment and numerical decline of CD8+ T cells during HIV infection has a
profound effect on disease progression, but only limited microarray studies have used CD8+ …
profound effect on disease progression, but only limited microarray studies have used CD8+ …
influence of ART on HIV genetics
FR Simonetti, MF Kearney - Current Opinion in HIV and AIDS, 2015 - journals.lww.com
Plasma HIV RNA shows no evidence for evolution during ART, suggesting that HIV
persistence is not driven by low-level, ongoing replication. The emergence of identical viral …
persistence is not driven by low-level, ongoing replication. The emergence of identical viral …
[HTML][HTML] Heterogeneity in HIV and cellular transcription profiles in cell line models of latent and productive infection: implications for HIV latency
Background HIV-infected cell lines are widely used to study latent HIV infection, which is
considered the main barrier to HIV cure. We hypothesized that these cell lines differ from …
considered the main barrier to HIV cure. We hypothesized that these cell lines differ from …
HIV-1 transcriptional activity during frequent longitudinal sampling in aviremic patients on antiretroviral therapy
S Leth, R Nymann, S Jørgensen, R Olesen… - Aids, 2016 - journals.lww.com
Background: HIV-1 transcription during suppressive antiretroviral therapy (ART) is not well
understood. This is problematic as latency-reactivating agent-based HIV-1 eradication trials …
understood. This is problematic as latency-reactivating agent-based HIV-1 eradication trials …