A landscape of pharmacogenomic interactions in cancer

F Iorio, TA Knijnenburg, DJ Vis, GR Bignell… - Cell, 2016 - cell.com
Systematic studies of cancer genomes have provided unprecedented insights into the
molecular nature of cancer. Using this information to guide the development and application …

Discovering novel pharmacogenomic biomarkers by imputing drug response in cancer patients from large genomics studies

P Geeleher, Z Zhang, F Wang, RF Gruener… - Genome …, 2017 - genome.cshlp.org
Obtaining accurate drug response data in large cohorts of cancer patients is very
challenging; thus, most cancer pharmacogenomics discovery is conducted in preclinical …

Predicting tumor response to drugs based on gene-expression biomarkers of sensitivity learned from cancer cell lines

Y Li, DM Umbach, JM Krahn, I Shats, X Li, L Li - BMC genomics, 2021 - Springer
Background Human cancer cell line profiling and drug sensitivity studies provide valuable
information about the therapeutic potential of drugs and their possible mechanisms of action …

Development and clinical application of an integrative genomic approach to personalized cancer therapy

AV Uzilov, W Ding, MY Fink, Y Antipin, AS Brohl… - Genome medicine, 2016 - Springer
Background Personalized therapy provides the best outcome of cancer care and its
implementation in the clinic has been greatly facilitated by recent convergence of enormous …

Precision oncology: the road ahead

D Senft, MDM Leiserson, E Ruppin, AR Ze'ev - Trends in molecular …, 2017 - cell.com
Current efforts in precision oncology largely focus on the benefit of genomics-guided
therapy. Yet, advances in sequencing techniques provide an unprecedented view of the …

Deciphering cellular states of innate tumor drug responses

E Graudens, V Boulanger, C Mollard… - Genome biology, 2006 - Springer
Background The molecular mechanisms underlying innate tumor drug resistance, a major
obstacle to successful cancer therapy, remain poorly understood. In colorectal cancer …

In silico prescription of anticancer drugs to cohorts of 28 tumor types reveals targeting opportunities

C Rubio-Perez, D Tamborero, MP Schroeder… - Cancer cell, 2015 - cell.com
Large efforts dedicated to detect somatic alterations across tumor genomes/exomes are
expected to produce significant improvements in precision cancer medicine. However, high …

Predicting drug susceptibility of non–small cell lung cancers based on genetic lesions

ML Sos, K Michel, T Zander, J Weiss… - The Journal of …, 2009 - Am Soc Clin Investig
Somatic genetic alterations in cancers have been linked with response to targeted
therapeutics by creation of specific dependency on activated oncogenic signaling pathways …

PanDrugs: a novel method to prioritize anticancer drug treatments according to individual genomic data

E Piñeiro-Yáñez, M Reboiro-Jato, G Gómez-López… - Genome medicine, 2018 - Springer
Background Large-sequencing cancer genome projects have shown that tumors have
thousands of molecular alterations and their frequency is highly heterogeneous. In such …

Genomic medicine frontier in human solid tumors: prospects and challenges

R Dienstmann, J Rodon, J Barretina… - Journal of Clinical …, 2013 - ascopubs.org
Recent discoveries of genomic alterations that underlie and promote the malignant
phenotype, together with an expanded repertoire of targeted agents, have provided many …