[HTML][HTML] Characterization, prediction and evolution of plant peroxisomal targeting signals type 1 (PTS1s)

S Reumann, G Chowdhary, T Lingner - Biochimica et Biophysica Acta (BBA …, 2016 - Elsevier
Our knowledge of the proteome of plant peroxisomes and their functional plasticity is far from
being complete, primarily due to major technical challenges in experimental proteome …

Prediction of peroxisomal matrix proteins in plants

S Reumann, G Chowdhary - Proteomics of Peroxisomes: Identifying Novel …, 2018 - Springer
Our knowledge of the proteome of plant peroxisomes is far from being complete, and the
functional complexity and plasticity of this cell organelle are amazingly high particularly in …

PredPlantPTS1: A Web Server for the Prediction of Plant Peroxisomal Proteins

S Reumann, D Buchwald, T Lingner - Frontiers in plant science, 2012 - frontiersin.org
Prediction of subcellular protein localization is essential to correctly assign unknown
proteins to cell organelle-specific protein networks and to ultimately determine protein …

Experimental validation of plant peroxisomal targeting prediction algorithms by systematic comparison of in vivo import efficiency and in vitro PTS1 binding affinity

NS Skoulding, G Chowdhary, MJ Deus, A Baker… - Journal of Molecular …, 2015 - Elsevier
Most peroxisomal matrix proteins possess a C-terminal targeting signal type 1 (PTS1).
Accurate prediction of functional PTS1 sequences and their relative strength by …

Identification of novel plant peroxisomal targeting signals by a combination of machine learning methods and in vivo subcellular targeting analyses

T Lingner, AR Kataya, GE Antonicelli, A Benichou… - The Plant …, 2011 - academic.oup.com
In the postgenomic era, accurate prediction tools are essential for identification of the
proteomes of cell organelles. Prediction methods have been developed for peroxisome …

Specification of the peroxisome targeting signals type 1 and type 2 of plant peroxisomes by bioinformatics analyses

S Reumann - Plant physiology, 2004 - academic.oup.com
To specify the C-terminal peroxisome targeting signal type 1 (PTS1) and the N-terminal
PTS2 for higher plants, a maximum number of plant cDNAs and expressed sequence tags …

Direct Interaction and Determination of Binding Domains among Peroxisomal Import Factors in Arabidopsis thaliana

K Nito, M Hayashi, M Nishimura - Plant and cell physiology, 2002 - academic.oup.com
We analyzed the role of Arabidopsis orthologues of human Pex14p, Pex5p and Pex7p that
are central components of peroxisomal protein import machinery. Immunoblot analysis …

Toward a definition of the complete proteome of plant peroxisomes: where experimental proteomics must be complemented by bioinformatics

S Reumann - Proteomics, 2011 - Wiley Online Library
In the past few years, proteome analysis of Arabidopsis peroxisomes has been established
by the complementary efforts of four research groups and has emerged as the major …

Motif refinement of the peroxisomal targeting signal 1 and evaluation of taxon-specific differences

G Neuberger, S Maurer-Stroh, B Eisenhaber… - Journal of molecular …, 2003 - Elsevier
Eukaryote peroxisomes, plant glyoxysomes and trypanosomal glycosomes belong to the
microbody family of organelles that compartmentalise a variety of biochemical processes …

[HTML][HTML] Peroxisome targeting signal 1: is it really a simple tripeptide?

C Brocard, A Hartig - Biochimica et Biophysica Acta (BBA)-Molecular Cell …, 2006 - Elsevier
Originally, the peroxisomal targeting signal 1 (PTS1) was defined as a tripeptide at the C-
terminus of proteins prone to be imported into the peroxisomal matrix. The corresponding …