[HTML][HTML] Genome-wide association and high-resolution phenotyping link Oryza sativa panicle traits to numerous trait-specific QTL clusters

S Crowell, P Korniliev, A Falcao, A Ismail… - Nature …, 2016 - nature.com
Rice panicle architecture is a key target of selection when breeding for yield and grain
quality. However, panicle phenotypes are difficult to measure and susceptible to …

High-resolution inflorescence phenotyping using a novel image-analysis pipeline, PANorama

S Crowell, AX Falcão, A Shah, Z Wilson… - Plant …, 2014 - academic.oup.com
Variation in inflorescence development is an important target of selection for numerous crop
species, including many members of the Poaceae (grasses). In Asian rice (Oryza sativa) …

[HTML][HTML] A genome-wide association study using a Vietnamese landrace panel of rice (Oryza sativa) reveals new QTLs controlling panicle morphological traits

KN Ta, NG Khong, TL Ha, DT Nguyen, DC Mai… - BMC plant biology, 2018 - Springer
Context Yield improvement is an important issue for rice breeding. Panicle architecture is
one of the key components of rice yield and exhibits a large diversity. To identify the …

[HTML][HTML] Uncovering the genetic mechanisms regulating panicle architecture in rice with GPWAS and GWAS

H Zhong, S Liu, X Meng, T Sun, Y Deng, W Kong… - BMC genomics, 2021 - Springer
Background The number of panicles per plant, number of grains per panicle, and 1000-grain
weight are important factors contributing to the grain yield per plant in rice. The Rice …

[HTML][HTML] Transcriptome-wide association analyses reveal the impact of regulatory variants on rice panicle architecture and causal gene regulatory networks

L Ming, D Fu, Z Wu, H Zhao, X Xu, T Xu, X Xiong… - Nature …, 2023 - nature.com
Panicle architecture is a key determinant of rice grain yield and is mainly determined at the 1-
2 mm young panicle stage. Here, we investigated the transcriptome of the 1-2 mm young …

Quantitative trait loci identification and meta-analysis for rice panicle-related traits

Y Wu, M Huang, X Tao, T Guo, Z Chen… - Molecular Genetics and …, 2016 - Springer
Rice yield is a complex trait controlled by quantitative trait loci (QTLs). In the past three
decades, thousands of QTLs for rice yield traits have been detected, but only a very small …

[HTML][HTML] Combining image analysis, genome wide association studies and different field trials to reveal stable genetic regions related to panicle architecture and the …

MC Rebolledo, AL Peña, J Duitama, DF Cruz… - Frontiers in plant …, 2016 - frontiersin.org
Number of spikelets per panicle (NSP) is a key trait to increase yield potential in rice (O.
sativa). The architecture of the rice inflorescence which is mainly determined by the length …

[HTML][HTML] Genome-Wide Association Mapping for Yield and Other Agronomic Traits in an Elite Breeding Population of Tropical Rice (Oryza sativa)

H Begum, JE Spindel, A Lalusin, T Borromeo… - PloS one, 2015 - journals.plos.org
Genome-wide association mapping studies (GWAS) are frequently used to detect QTL in
diverse collections of crop germplasm, based on historic recombination events and linkage …

[HTML][HTML] Open access resources for genome-wide association mapping in rice

SR McCouch, MH Wright, CW Tung, LG Maron… - Nature …, 2016 - nature.com
Increasing food production is essential to meet the demands of a growing human
population, with its rising income levels and nutritional expectations. To address the …

[HTML][HTML] Genome-wide association mapping in a rice MAGIC plus population detects QTLs and genes useful for biofortification

GIL Descalsota, BPM Swamy, H Zaw… - Frontiers in Plant …, 2018 - frontiersin.org
The development of rice genotypes with micronutrient-dense grains and disease resistance
is one of the major priorities in rice improvement programs. We conducted Genome-wide …