Whole genome sequencing of Guzerá cattle reveals genetic variants in candidate genes for production, disease resistance, and heat tolerance

IC Rosse, JG Assis, FS Oliveira, LR Leite, F Araujo… - Mammalian …, 2017 - Springer
In bovines, artificial selection has produced a large number of breeds which differ in
production, environmental adaptation, and health characteristics. To investigate the genetic …

Whole genome sequencing of Gir cattle for identifying polymorphisms and loci under selection

X Liao, F Peng, S Forni, D McLaren, G Plastow… - …, 2013 - cdnsciencepub.com
Genetic variation in Gir cattle (Bos indicus) has so far not been well characterized. In this
study, we used whole genome sequencing of three Gir bulls and a pooled sample from …

Genome sequencing and de novo and reference-based genome assemblies of Bos indicus breeds

A Chakraborty, MS Bisht, R Saxena, S Mahajan… - Genes & Genomics, 2023 - Springer
Abstract Background Indian cattle breeds (Bos indicus) are known for their remarkable
adaptability to hot and humid climates, higher nutritious quality of milk, better disease …

Genomic signatures reveal new evidences for selection of important traits in domestic cattle

L Xu, DM Bickhart, JB Cole… - Molecular biology …, 2015 - academic.oup.com
We investigated diverse genomic selections using high-density single nucleotide
polymorphism data of five distinct cattle breeds. Based on allele frequency differences, we …

Whole-Genome Resequencing of Xiangxi Cattle Identifies Genomic Diversity and Selection Signatures

X Luo, J Li, C Xiao, L Sun, W Xiang, N Chen… - Frontiers in …, 2022 - frontiersin.org
Understanding the genetic diversity in Xiangxi cattle may facilitate our efforts toward further
breeding programs. Here we compared 23 Xiangxi cattle with 78 published genomes of 6 …

Whole-genome sequencing reveals genomic diversity and selection signatures in Xia'nan cattle

X Song, Z Yao, Z Zhang, S Lyu, N Chen, X Qi, X Liu… - BMC genomics, 2024 - Springer
Background The crossbreeding of specialized beef cattle breeds with Chinese indigenous
cattle is a common method of genetic improvement. Xia'nan cattle, a crossbreed of Charolais …

Chromosome-level genome assembly and annotation of the Yunling cattle with PacBio and Hi-C sequencing data

Z Wei, L Zhang, L Gao, J Chen, L Peng, L Yang - Scientific Data, 2024 - nature.com
Yunling cattle is a new breed of beef cattle bred in Yunnan Province, China. It is bred by
crossing the Brahman, the Murray Grey and the Yunnan Yellow cattle. Yunling cattle can …

Whole-genome sequencing reveals insights into the adaptation of French Charolais cattle to Cuban tropical conditions

LC Ramírez-Ayala, D Rocha, SE Ramos-Onsins… - Genetics Selection …, 2021 - Springer
Background In the early 20th century, Cuban farmers imported Charolais cattle (CHFR)
directly from France. These animals are now known as Chacuba (CHCU) and have become …

Assessment of copy number variants in three Brazilian locally adapted cattle breeds using whole‐genome re‐sequencing data

E Peripolli, NB Stafuzza, MA Machado… - Animal …, 2023 - Wiley Online Library
Further characterization of genetic structural variations should strongly focus on small and
endangered local breeds given their role in unraveling genes and structural variants …

Whole-genome sequencing reveals mutational landscape underlying phenotypic differences between two widespread Chinese cattle breeds

Y Xu, Y Jiang, T Shi, H Cai, X Lan, X Zhao, M Plath… - PLoS …, 2017 - journals.plos.org
Whole-genome sequencing provides a powerful tool to obtain more genetic variability that
could produce a range of benefits for cattle breeding industry. Nanyang (Bos indicus) and …