Characterising plant pathogen communities and their environmental drivers at a national scale: A thesis submitted in partial fulfilment of the requirements for the …
A Makiola - 2018 - researcharchive.lincoln.ac.nz
Plant pathogens play a critical role for global food security, conservation of natural
ecosystems and future resilience and sustainability of ecosystem services in general. Thus …
ecosystems and future resilience and sustainability of ecosystem services in general. Thus …
Biases in the metabarcoding of plant pathogens using rust fungi as a model system
Plant pathogens such as rust fungi (Pucciniales) are of global economic and ecological
importance. This means there is a critical need to reliably and costeffectively detect …
importance. This means there is a critical need to reliably and costeffectively detect …
Speaker Abstracts-Wednesday 5 December
Understanding what drives the dynamics of plant pathogens at the largest scales is crucial
for the maintenance of global food security, conservation of natural ecosystems and future …
for the maintenance of global food security, conservation of natural ecosystems and future …
Land use is a determinant of plant pathogen alphabut not betadiversity
Little is known about the diversity patterns of plant pathogens and how they change with
land use at a broad scale. We employed DNA metabarcoding to describe the diversity and …
land use at a broad scale. We employed DNA metabarcoding to describe the diversity and …
A multiscale approach to plant disease using the metacommunity concept
Plant disease arises from the interaction of processes occurring at multiple spatial and
temporal scales. With new tools such as next-generation sequencing, we are learning about …
temporal scales. With new tools such as next-generation sequencing, we are learning about …
Towards improved detection and identification of rust fungal pathogens in environmental samples using a metabarcoding approach
The dispersion of fungal inocula such as the airborne spores of rust fungi (Pucciniales) can
be monitored through metabarcoding of the internal transcribed spacer 2 (ITS2) of the rRNA …
be monitored through metabarcoding of the internal transcribed spacer 2 (ITS2) of the rRNA …
Opportunities and limitations for DNA metabarcoding in Australasian plant-pathogen biosecurity
Protecting plants from new pathogen incursions requires effective surveillance practices.
Environmental DNA (eDNA) metabarcoding shows considerable promise for detecting …
Environmental DNA (eDNA) metabarcoding shows considerable promise for detecting …
Plant-associated fungal communities in the light of meta'omics
D Peršoh - Fungal Diversity, 2015 - Springer
Approaches for the cultivation-independent analysis of microbial communities are
summarized as meta'omics, which predominantly includes metagenomic,-transcriptomic …
summarized as meta'omics, which predominantly includes metagenomic,-transcriptomic …
[HTML][HTML] Opportunities for diversified usage of metabarcoding data for fungal biogeography through increased metadata quality
The widely adopted use of metabarcoding techniques and the ability to sequence microbial
communities directly from environmental samples have advanced the field of fungal ecology …
communities directly from environmental samples have advanced the field of fungal ecology …
Trees, fungi and bacteria: tripartite metatranscriptomics of a root microbiome responding to soil contamination
E Gonzalez, FE Pitre, AP Pagé, J Marleau… - Microbiome, 2018 - Springer
Background One method for rejuvenating land polluted with anthropogenic contaminants is
through phytoremediation, the reclamation of land through the cultivation of specific crops …
through phytoremediation, the reclamation of land through the cultivation of specific crops …