[HTML][HTML] Comprehensive analysis of alternative splicing across tumors from 8,705 patients
Our comprehensive analysis of alternative splicing across 32 The Cancer Genome Atlas
cancer types from 8,705 patients detects alternative splicing events and tumor variants by …
cancer types from 8,705 patients detects alternative splicing events and tumor variants by …
OncoSplicing: an updated database for clinically relevant alternative splicing in 33 human cancers
Y Zhang, X Yao, H Zhou, X Wu, J Tian… - Nucleic Acids …, 2022 - academic.oup.com
Alternative splicing (AS) represents a crucial method in mRNA level to regulate gene
expression and contributes to the protein complexity. Abnormal splicing has been reported …
expression and contributes to the protein complexity. Abnormal splicing has been reported …
The functional impact of alternative splicing in cancer
Alternative splicing changes are frequently observed in cancer and are starting to be
recognized as important signatures for tumor progression and therapy. However, their …
recognized as important signatures for tumor progression and therapy. However, their …
Alternative splicing in colon, bladder, and prostate cancer identified by exon array analysis
K Thorsen, KD Sørensen, AS Brems-Eskildsen… - Molecular & Cellular …, 2008 - ASBMB
Alternative splicing enhances proteome diversity and modulates cancer-associated proteins.
To identify tissue-and tumor-specific alternative splicing, we used the GeneChip Human …
To identify tissue-and tumor-specific alternative splicing, we used the GeneChip Human …
Detection of recurrent alternative splicing switches in tumor samples reveals novel signatures of cancer
E Sebestyén, M Zawisza, E Eyras - Nucleic acids research, 2015 - academic.oup.com
The determination of the alternative splicing isoforms expressed in cancer is fundamental for
the development of tumor-specific molecular targets for prognosis and therapy, but it is …
the development of tumor-specific molecular targets for prognosis and therapy, but it is …
Computational analysis and experimental validation of tumor-associated alternative RNA splicing in human cancer
A genome-wide computational screen was performed to identify tumor-associated
alternative RNA splicing isoforms. A BLAST algorithm was used to compare 11,014 genes …
alternative RNA splicing isoforms. A BLAST algorithm was used to compare 11,014 genes …
Alternative splicing in cancer: noise, functional, or systematic?
RI Skotheim, M Nees - The international journal of biochemistry & cell …, 2007 - Elsevier
Pre-messenger RNA splicing is a fine-tuned process that generates multiple functional
variants from individual genes. Various cell types and developmental stages regulate …
variants from individual genes. Various cell types and developmental stages regulate …
Widespread intron retention diversifies most cancer transcriptomes
H Dvinge, RK Bradley - Genome medicine, 2015 - Springer
Background Somatic mutations affecting components of the RNA splicing machinery occur
with high frequencies across many tumor types. These mutations give rise to distinct …
with high frequencies across many tumor types. These mutations give rise to distinct …
CancerSplicingQTL: a database for genome-wide identification of splicing QTLs in human cancer
J Tian, Z Wang, S Mei, N Yang, Y Yang… - Nucleic acids …, 2019 - academic.oup.com
Alternative splicing (AS) is a widespread process that increases structural transcript variation
and proteome diversity. Aberrant splicing patterns are frequently observed in cancer …
and proteome diversity. Aberrant splicing patterns are frequently observed in cancer …
TSVdb: a web-tool for TCGA splicing variants analysis
Background Collaborative projects such as The Cancer Genome Atlas (TCGA) have
generated various-omics and clinical data on cancer. Many computational tools have been …
generated various-omics and clinical data on cancer. Many computational tools have been …