Genome Sequencing and Carbohydrate-Active Enzyme (CAZyme) Repertoire of the White Rot Fungus Flammulina elastica
YJ Park, YU Jeong, WS Kong - International journal of molecular sciences, 2018 - mdpi.com
Next-generation sequencing (NGS) of the Flammulina elastica (wood-rotting basidiomycete)
genome was performed to identify carbohydrate-active enzymes (CAZymes). The resulting …
genome was performed to identify carbohydrate-active enzymes (CAZymes). The resulting …
Genome-Wide Comparison of Carbohydrate-Active Enzymes (CAZymes) Repertoire of Flammulina ononidis
YJ Park, WS Kong - Mycobiology, 2018 - Taylor & Francis
Whole-genome sequencing of Flammulina ononidis, a wood-rotting basidiomycete, was
performed to identify genes associated with carbohydrate-active enzymes (CAZymes). A …
performed to identify genes associated with carbohydrate-active enzymes (CAZymes). A …
Comparative study of genome-wide plant biomass-degrading CAZymes in white rot, brown rot and soft rot fungi
AK Sista Kameshwar, W Qin - Mycology, 2018 - Taylor & Francis
We have conducted a genome-level comparative study of basidiomycetes wood-rotting fungi
(white, brown and soft rot) to understand the total plant biomass (lignin, cellulose …
(white, brown and soft rot) to understand the total plant biomass (lignin, cellulose …
Draft genome analysis of lignocellulolytic enzymes producing Aspergillus terreus with structural insight of β-glucosidases through molecular docking approach
T Dadheech, S Jakhesara, PS Chauhan… - International journal of …, 2019 - Elsevier
Members of the genus Aspergillus are extensively studied ascomycetes because of their
ability to synthesize high value-added compounds and enzymes of industrial interest …
ability to synthesize high value-added compounds and enzymes of industrial interest …
Combined genome and transcriptome sequencing to investigate the plant cell wall degrading enzyme system in the thermophilic fungus Malbranchea cinnamomea
S Hüttner, TT Nguyen, Z Granchi… - Biotechnology for …, 2017 - Springer
Background Genome and transcriptome sequencing has greatly facilitated the
understanding of biomass-degrading mechanisms in a number of fungal species. The …
understanding of biomass-degrading mechanisms in a number of fungal species. The …
New method for identifying fungal kingdom enzyme hotspots from genome sequences
Fungal genome sequencing data represent an enormous pool of information for enzyme
discovery. Here, we report a new approach to identify and quantitatively compare biomass …
discovery. Here, we report a new approach to identify and quantitatively compare biomass …
mycoCLAP, the database for characterized lignocellulose-active proteins of fungal origin: resource and text mining curation support
K Strasser, E McDonnell, C Nyaga, M Wu, S Wu… - Database, 2015 - academic.oup.com
Enzymes active on components of lignocellulosic biomass are used for industrial
applications ranging from food processing to biofuels production. These include a diverse …
applications ranging from food processing to biofuels production. These include a diverse …
Genome description of Phlebia radiata 79 with comparative genomics analysis on lignocellulose decomposition machinery of phlebioid fungi
M Mäkinen, J Kuuskeri, P Laine, OP Smolander… - BMC genomics, 2019 - Springer
Background The white rot fungus Phlebia radiata, a type species of the genus Phlebia, is an
efficient decomposer of plant cell wall polysaccharides, modifier of softwood and hardwood …
efficient decomposer of plant cell wall polysaccharides, modifier of softwood and hardwood …
Cellulose and hemicellulose-degrading enzymes in Fusarium commune transcriptome and functional characterization of three identified xylanases
Specific enzymes from plant-pathogenic microbes demonstrate high effectiveness for natural
lignocellulosic biomass degradation and utilization. The secreted lignocellulolytic enzymes …
lignocellulosic biomass degradation and utilization. The secreted lignocellulolytic enzymes …
The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown
A Levasseur, A Lomascolo, O Chabrol… - BMC genomics, 2014 - Springer
Background Saprophytic filamentous fungi are ubiquitous micro-organisms that play an
essential role in photosynthetic carbon recycling. The wood-decayer Pycnoporus …
essential role in photosynthetic carbon recycling. The wood-decayer Pycnoporus …