[HTML][HTML] Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome …

P Jedlicka, M Lexa, I Vanat, R Hobza, E Kejnovsky - Mobile DNA, 2019 - Springer
Background Nesting is common in LTR retrotransposons, especially in large genomes
containing a high number of elements. Results We analyzed 12 plant genomes and …

[HTML][HTML] Genome-wide analysis of cotton miRNAs during whitefly infestation offers new insights into plant-herbivore interaction

J Li, JJ Hull, S Liang, Q Wang, L Chen… - International journal of …, 2019 - mdpi.com
Although the regulatory function of miRNAs and their targets have been characterized in
model plants, a possible underlying role in the cotton response to herbivore infestation has …

[HTML][HTML] Cumulative and different genetic effects contributed to yield heterosis using maternal and paternal backcross populations in Upland cotton

L Ma, Y Wang, B Ijaz, J Hua - Scientific Reports, 2019 - nature.com
Heterosis has been utilized in commercial production, but the heterosis mechanism has
remained vague. Hybrid cotton is suitable to dissect the heterosis mechanism. In order to …

[HTML][HTML] GhFAD2–3 is required for anther development in Gossypium hirsutum

F Liu, L Ma, Y Wang, Y Li, X Zhang, F Xue, X Nie… - BMC plant biology, 2019 - Springer
Background In higher plants, the FAD2 gene encodes the microsomal oleate Δ12-
desaturase, one of the key enzymes essential for the biosynthesis of the polyunsaturated …

[HTML][HTML] Genetic basis of fiber improvement and decreased stress tolerance in cultivated versus semi-domesticated upland cotton

G Zhu, W Li, G Wang, L Li, Q Si, C Cai… - Frontiers in Plant …, 2019 - frontiersin.org
Crop domestication from wild ancestors has resulted in the wide adaptation coupled with
improved yield and quality traits. However, the genetic basis of many domesticated …

[HTML][HTML] Genome-wide mining and identification of protein Kinase Gene Family impacts salinity stress tolerance in highly dense genetic map developed from …

M Shehzad, Z Zhou, A Ditta, X Cai, M Khan, Y Xu… - Agronomy, 2019 - mdpi.com
Abiotic stress is an important limiting factor in crop growth and yield around the world. Owing
to the continued genetic erosion of the upland cotton germplasm due to intense selection …

Exceptional subgenome stability and functional divergence in allotetraploid teff, the primary cereal crop in Ethiopia

R VanBuren, CM Wai, J Pardo, AE Yocca, X Wang… - BioRxiv, 2019 - biorxiv.org
Teff (Eragrostis tef) is a cornerstone of food security in the Horn of Africa, where it is prized
for stress resilience, grain nutrition, and market value. Despite its overall importance to small …

[HTML][HTML] Evolutionary conservation and divergence of genes encoding 3-hydroxy-3-methylglutaryl coenzyme A synthase in the allotetraploid cotton species Gossypium …

W Liu, Z Zhang, W Zhu, Z Ren, L Jia, W Li, Z Ma - Cells, 2019 - mdpi.com
Polyploidization is important for the speciation and subsequent evolution of many plant
species. Analyses of the duplicated genes produced via polyploidization events may clarify …

[HTML][HTML] Genome-Wide Identification and Expression Analysis of the Metacaspase Gene Family in Gossypium Species

S Fan, A Liu, Z Zhang, X Zou, X Jiang, J Huang, L Fan… - Genes, 2019 - mdpi.com
Metacaspases (MCs) are cysteine proteases that are important for programmed cell death
(PCD) in plants. In this study, we identified 89 MC genes in the genomes of four Gossypium …

[HTML][HTML] Identification and characterization analysis of sulfotransferases (SOTs) gene family in cotton (Gossypium) and its involvement in fiber development

L Wang, X Liu, X Wang, Z Pan, X Geng, B Chen, B Liu… - BMC plant biology, 2019 - Springer
Abstract Background Sulfotransferases (SOTs)(EC 2.8. 2.-) play a crucial role in the sulphate
conjugation reaction involved in plant growth, vigor, stress resistance and pathogen …