[图书][B] Omic association studies with r and bioconductor

JR González, A Cáceres - 2019 - taylorfrancis.com
After the great expansion of genome-wide association studies, their scientific methodology
and, notably, their data analysis has matured in recent years, and they are a keystone in …

Is replication the gold standard for validating genome-wide association findings?

YJ Liu, CJ Papasian, JF Liu, J Hamilton, HW Deng - PloS one, 2008 - journals.plos.org
With the advent of genome-wide association (GWA) studies, researchers are hoping that
reliable genetic association of common human complex diseases/traits can be detected …

R PheWAS: data analysis and plotting tools for phenome-wide association studies in the R environment

RJ Carroll, L Bastarache, JC Denny - Bioinformatics, 2014 - academic.oup.com
Phenome-wide association studies (PheWAS) have been used to replicate known genetic
associations and discover new phenotype associations for genetic variants. This PheWAS …

SEQMINER: An Rpackage to facilitate the functional interpretation of sequencebased associations

X Zhan, DJ Liu - Genetic epidemiology, 2015 - Wiley Online Library
Nextgeneration sequencing has enabled the study of a comprehensive catalogue of
genetic variants for their impact on various complex diseases. Numerous consortia studies …

MR-Base: a platform for systematic causal inference across the phenome using billions of genetic associations

G Hemani, J Zheng, KH Wade, C Laurin, B Elsworth… - 2018 - repository.cam.ac.uk
Results from genome-wide association studies (GWAS) can be used to infer causal
relationships between phenotypes, using a strategy known as 2-sample Mendelian …

Genome wide association study: its theory and methodological review

Y Kamatani - Clinical Calcium, 2016 - europepmc.org
This review article describes the background and practical aspects for the Genome Wide
Association Studies (GWAS). I introduce several softwares which are actually used in …

The MR-Base platform supports systematic causal inference across the human phenome

G Hemani, J Zheng, B Elsworth, KH Wade… - elife, 2018 - elifesciences.org
Results from genome-wide association studies (GWAS) can be used to infer causal
relationships between phenotypes, using a strategy known as 2-sample Mendelian …

[PDF][PDF] NOVEL QUANTITATIVE METHOD FOR GENETIC ASSOCIATION TESTING

GH Schoenmacker, T Claassen, T Heskes, B Franke… - 2019 - repository.ubn.ru.nl
Background: Pathway analysis is widely used in omics studies. Pathway-based data
integration and visualization is a critical component of the analysis. To address this need, we …

Multi-omics study for interpretation of genome-wide association study

M Akiyama - Journal of Human Genetics, 2021 - nature.com
Genome-wide association studies (GWASs) have identified thousands of genetic loci
associated with complex traits, including a wide variety of diseases. Despite the successful …

Toward a road map for global-omics: a primer on-omic technologies

SS Coughlin - American journal of epidemiology, 2014 - academic.oup.com
As highlighted in a recent editorial in the Journal (Am J Epidemiol. 2014; 180 (2): 127–128),
the research area of “-omics” includes genomics, proteomics, metabolomics, and nascent …