Longitudinal single cell transcriptomics reveals Krt8+ alveolar epithelial progenitors in lung regeneration

M Strunz, LM Simon, M Ansari, LF Mattner, I Angelidis… - BioRxiv, 2019 - biorxiv.org
Lung injury activates quiescent stem and progenitor cells to regenerate alveolar structures.
The sequence and coordination of transcriptional programs during this process has largely …

[HTML][HTML] Alveolar epithelial progenitor cells require Nkx2-1 to maintain progenitor-specific epigenomic state during lung homeostasis and regeneration

A Toth, P Kannan, J Snowball, M Kofron… - Nature …, 2023 - nature.com
Lung epithelial regeneration after acute injury requires coordination cellular coordination to
pattern the morphologically complex alveolar gas exchange surface. During adult lung …

[HTML][HTML] Alveolar regeneration through a Krt8+ transitional stem cell state that persists in human lung fibrosis

M Strunz, LM Simon, M Ansari, JJ Kathiriya… - Nature …, 2020 - nature.com
The cell type specific sequences of transcriptional programs during lung regeneration have
remained elusive. Using time-series single cell RNA-seq of the bleomycin lung injury model …

[HTML][HTML] Single-cell division tracing and transcriptomics reveal cell types and differentiation paths in the regenerating lung

LR Martins, L Sieverling, M Michelhans… - Nature …, 2024 - nature.com
Understanding the molecular and cellular processes involved in lung epithelial regeneration
may fuel the development of therapeutic approaches for lung diseases. We combine mouse …

[HTML][HTML] Distinct airway epithelial stem cells hide among club cells but mobilize to promote alveolar regeneration

JJ Kathiriya, AN Brumwell, JR Jackson, X Tang… - Cell stem cell, 2020 - cell.com
Lung injury activates specialized adult epithelial progenitors to regenerate the epithelium.
Depending on the extent of injury, both remaining alveolar type II cells (AEC2s) and distal …

[HTML][HTML] Single-cell RNA sequencing identifies TGF-β as a key regenerative cue following LPS-induced lung injury

KA Riemondy, NL Jansing, P Jiang, EF Redente… - JCI insight, 2019 - ncbi.nlm.nih.gov
Many lung diseases result from a failure of efficient regeneration of damaged alveolar
epithelial cells (AECs) after lung injury. During regeneration, AEC2s proliferate to replace …

[HTML][HTML] Reconstructed single-cell fate trajectories define lineage plasticity windows during differentiation of human PSC-derived distal lung progenitors

K Hurley, J Ding, C Villacorta-Martin, MJ Herriges… - Cell stem cell, 2020 - cell.com
Alveolar epithelial type 2 cells (AEC2s) are the facultative progenitors responsible for
maintaining lung alveoli throughout life but are difficult to isolate from patients. Here, we …

Human alveolar Type 2 epithelium transdifferentiates into metaplastic KRT5+ basal cells during alveolar repair

JJ Kathiriya, C Wang, A Brumwell, M Cassandras… - BioRxiv, 2020 - biorxiv.org
Understanding differential lineage potential of orthologous stem cells across species can
shed light on human disease. Here, utilizing 3D organoids, single cell RNAseq, and …

[HTML][HTML] Human alveolar progenitors generate dual lineage bronchioalveolar organoids

K Hoffmann, B Obermayer, K Hönzke… - Communications …, 2022 - nature.com
Mechanisms of epithelial renewal in the alveolar compartment remain incompletely
understood. To this end, we aimed to characterize alveolar progenitors. Single-cell RNA …

Transitional cell states sculpt tissue topology during lung regeneration

A Konkimalla, S Konishi, L Macadlo, Y Kobayashi… - Cell Stem Cell, 2023 - cell.com
Organ regeneration requires dynamic cell interactions to reestablish cell numbers and tissue
architecture. While we know the identity of progenitor cells that replace lost tissue, the …