Technical pitfalls that bias comparative microbial community analyses of aquatic disease

I Hewson - Diseases of Aquatic Organisms, 2019 - int-res.com
The accessibility of high-throughput DNA sequencing technologies has attracted the
application of comparative microbial analyses to study diseases. These studies present a …

Two decades of describing the unseen majority of aquatic microbial diversity

L Zinger, A Gobet, T Pommier - Molecular ecology, 2012 - Wiley Online Library
Aquatic environments harbour large and diverse microbial populations that ensure their
functioning and sustainability. In the current context of global change, characterizing …

[PDF][PDF] Aquatic microbial diversity: a sensitive and robust tool for assessing ecosystem health and functioning

GF MATCHER, PW Froneman, RA Dorrington - 2015 - wrcwebsite.azurewebsites.net
BACKGROUND Estuaries are ecologically and economically important aquatic systems,
functioning as feeding/staging sites for migratory birds, as nurseries for marine fish, and as …

How do the players play? A post-genomic analysis paradigm to understand aquatic ecosystem processes

T Reid, J Bergsveinson - Frontiers in Molecular Biosciences, 2021 - frontiersin.org
Culture-independent and meta-omics sequencing methods have shed considerable light on
the so-called “microbial dark matter” of Earth's environmental microbiome, improving our …

[图书][B] Handbook of methods in aquatic microbial ecology

PF Kemp, JJ Cole, BF Sherr, EB Sherr - 1993 - books.google.com
Handbook of Methods in Aquatic Microbial Ecology is the first comprehensive compilation of
85 fundamental methods in modern aquatic microbial ecology. Each method is presented in …

[HTML][HTML] Expanding ecological assessment by integrating microorganisms into routine freshwater biomonitoring

M Sagova-Mareckova, J Boenigk, A Bouchez… - Water research, 2021 - Elsevier
Bioindication has become an indispensable part of water quality monitoring in most
countries of the world, with the presence and abundance of bioindicator taxa, mostly …

Assigning cause for emerging diseases of aquatic organisms

KS Hutson, IC Davidson, J Bennett, R Poulin… - Trends in …, 2023 - cell.com
Resolving the cause of disease (= aetiology) in aquatic organisms is a challenging but
essential goal, heightened by increasing disease prevalence in a changing climate and an …

Freshwater Microbiology: Recent Updates and Prospects

V Bocanegra-García, H Martínez-Montoya… - Current Status of Fresh …, 2023 - Springer
Along with bacteria, other microorganisms are also key components of microbiota structure
of freshwater, and those include archaea, microbial eukaryotes, and viruses that together …

Microbial Metagenomics and the Shellfish Microbiome

AM Tarnecki - Microbiome of Finfish and Shellfish, 2023 - Springer
Taxonomic studies on the shellfish microbiome indicate that these complex microbial
communities are influenced by the host and environment, and that shifts in the microbiome …

High‐throughput molecular analyses of microbiomes as a tool to monitor the wellbeing of aquatic environments

C Michan, J Blasco, J Alhama - Microbial Biotechnology, 2021 - Wiley Online Library
Aquatic environments are the recipients of many sources of environmental stress that trigger
both local and global changes. To evaluate the associated risks to organisms and …