[HTML][HTML] MaXLinker: proteome-wide cross-link identifications with high specificity and sensitivity

K Yugandhar, TY Wang, AKY Leung, MC Lanz… - Molecular & Cellular …, 2020 - ASBMB
Protein-protein interactions play a vital role in nearly all cellular functions. Hence,
understanding their interaction patterns and three-dimensional structural conformations can …

Fast and highly efficient affinity enrichment of Azide-A-DSBSO cross-linked peptides

M Matzinger, W Kandioller, P Doppler… - Journal of proteome …, 2020 - ACS Publications
Cross-linking mass spectrometry is an increasingly used, powerful technique to study
protein–protein interactions or to provide structural information. Due to substochiometric …

Parallel detection of fundamental and sixth harmonic signals using an ICR cell with dipole and sixth harmonic detectors

SG Park, GA Anderson, JE Bruce - Journal of the American …, 2020 - ACS Publications
Fourier transform ion cyclotron resonance mass spectrometry (FTICR–MS) is a powerful
instrument for high-resolution analysis of biomolecules. However, relatively long signal …

Mass spectrometry-based methods for structural biology on a proteome-wide scale

LM Jones - Biochemical Society Transactions, 2020 - portlandpress.com
Mass spectrometry (MS) has long been used to study proteins mainly via sequence
identification and quantitation of expression abundance. In recent years, MS has emerged …

An experimentally generated peptide database increases the sensitivity of XL-MS with complex samples

I Parfentev, S Schilbach, P Cramer, H Urlaub - Journal of proteomics, 2020 - Elsevier
Cross-linking mass spectrometry (XL-MS) is steadily expanding its range of applications
from purified protein complexes to more complex samples like organelles and even entire …

Inhibition of cancer cell motility

RC Bergan, KA Scheidt, L Xu - US Patent 10,780,076, 2020 - Google Patents
Provided herein are compositions and methods for inhibiting cancer cell motility and/or
metastasis. In particular embodiments, KBU2046 (or an analog thereof) and one or more …

An acidic residue reactive and disulfide bond-containing cleavable cross-linker for probing protein 3D structures based on electrochemical mass spectrometry

L Cui, Y Ma, M Li, Z Wei, Y Huan, Q Fei, H Li, L Zheng - Talanta, 2020 - Elsevier
Cross-linking mass spectrometry (XL-MS) has attracted broad attention because of the
capability to probe three-dimensional structure of proteins. Up to now, several amine …

[PDF][PDF] Elucidation of protein-protein interactions in mitochondria by cross-linking mass spectrometry

A Linden - 2020 - ediss.uni-goettingen.de
Saccharomyces cerevisiae can generate energy in form of ATP either by fermenting or by
respiring nutrition. This depends on the availability of fermentable or non-fermentable …

The Use of Catalytically Dead Cas9 to Identify Key Transcription Regulators in Triple Negative Breast Cancer

E Zambon - 2020 - repository.cam.ac.uk
Triple-negative breast cancer (TNBC) accounts for approximately 15-20% of all breast
cancer cases. It tends to be aggressive, high-grade and poorly differentiated tumour with …

[PDF][PDF] Advancing Techniques of Structural Mass Spectrometry for Integrative Structural Modelling

DS Ziemianowicz - 2020 - prism.ucalgary.ca
Proteins are the fundamental functional units underlying all cellular activities. Protein
function emerges from structure. To understand cellular activity and the diseases that arise …