[HTML][HTML] Practical considerations for measuring the effective reproductive number, Rt

KM Gostic, L McGough, EB Baskerville… - PLoS computational …, 2020 - journals.plos.org
Estimation of the effective reproductive number R t is important for detecting changes in
disease transmission over time. During the Coronavirus Disease 2019 (COVID-19) …

A comparative analysis of statistical methods to estimate the reproduction number in emerging epidemics, with implications for the current coronavirus disease 2019 …

M O'Driscoll, C Harry, CA Donnelly… - Clinical Infectious …, 2021 - academic.oup.com
Background As the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
pandemic continues its rapid global spread, quantification of local transmission patterns has …

Estimation and worldwide monitoring of the effective reproductive number of SARS-CoV-2

JS Huisman, J Scire, DC Angst, J Li, RA Neher… - Elife, 2022 - elifesciences.org
The effective reproductive number R e is a key indicator of the growth of an epidemic. Since
the start of the SARS-CoV-2 pandemic, many methods and online dashboards have sprung …

[HTML][HTML] Estimating effective reproduction number using generation time versus serial interval, with application to COVID-19 in the Greater Toronto Area, Canada

J Knight, S Mishra - Infectious Disease Modelling, 2020 - Elsevier
Abstract background. The effective reproduction number R e (t) is a critical measure of
epidemic potential. R e (t) can be calculated in near real time using an incidence time series …

Reconciling early-outbreak estimates of the basic reproductive number and its uncertainty: framework and applications to the novel coronavirus (SARS-CoV-2) …

SW Park, BM Bolker… - Journal of the …, 2020 - royalsocietypublishing.org
A novel coronavirus (SARS-CoV-2) emerged as a global threat in December 2019. As the
epidemic progresses, disease modellers continue to focus on estimating the basic …

Commentary on the use of the reproduction number R during the COVID-19 pandemic

C Vegvari, S Abbott, F Ball… - … Methods in Medical …, 2022 - journals.sagepub.com
Since the beginning of the COVID-19 pandemic, the reproduction number [Formula: see text]
has become a popular epidemiological metric used to communicate the state of the …

The impact of changes in diagnostic testing practices on estimates of COVID-19 transmission in the United States

VE Pitzer, M Chitwood, J Havumaki… - American Journal of …, 2021 - academic.oup.com
Estimates of the reproductive number for novel pathogens, such as severe acute respiratory
syndrome coronavirus 2, are essential for understanding the potential trajectory of …

[HTML][HTML] Estimating the reproductive number R0 of SARS-CoV-2 in the United States and eight European countries and implications for vaccination

R Ke, E Romero-Severson, S Sanche… - Journal of theoretical …, 2021 - Elsevier
SARS-CoV-2 rapidly spread from a regional outbreak to a global pandemic in just a few
months. Global research efforts have focused on developing effective vaccines against …

[HTML][HTML] Estimating the time-varying reproduction number of COVID-19 with a state-space method

S Koyama, T Horie, S Shinomoto - PLoS computational biology, 2021 - journals.plos.org
After slowing down the spread of the novel coronavirus COVID-19, many countries have
started to relax their confinement measures in the face of critical damage to socioeconomic …

[HTML][HTML] Assessment of basic reproductive number for COVID-19 at global level: A meta-analysis

CJ Yu, ZX Wang, Y Xu, MX Hu, K Chen, G Qin - Medicine, 2021 - journals.lww.com
The pooled global R0 estimate for COVID-19 is 4.08 (95% CI, 3.09–5.39). New and shifting
epicenters have been developed across the world. The high R0 estimates suggest that an …