[PDF][PDF] Transposable Elements Contribute to Genome Dynamics and Gene Expression Variation in the Fungal Plant Pathogen Verticillium dahliae
DE Torres, BPHJ Thomma… - Genome Biology and …, 2021 - academic.oup.com
Transposable elements (TEs) are a major source of genetic and regulatory variation in their
host genome and are consequently thought to play important roles in evolution. Many fungal …
host genome and are consequently thought to play important roles in evolution. Many fungal …
Transposons passively and actively contribute to evolution of the two-speed genome of a fungal pathogen
Genomic plasticity enables adaptation to changing environments, which is especially
relevant for pathogens that engage in “arms races” with their hosts. In many pathogens …
relevant for pathogens that engage in “arms races” with their hosts. In many pathogens …
A unique chromatin profile defines adaptive genomic regions in a fungal plant pathogen
Genomes store information at scales beyond the linear nucleotide sequence, which impacts
genome function at the level of an individual, while influences on populations and long-term …
genome function at the level of an individual, while influences on populations and long-term …
Dynamics of transposable elements in recently diverged fungal pathogens: lineage-specific transposable element content and efficiency of genome defenses
Transposable elements (TEs) impact genome plasticity, architecture, and evolution in fungal
plant pathogens. The wide range of TE content observed in fungal genomes reflects diverse …
plant pathogens. The wide range of TE content observed in fungal genomes reflects diverse …
Intraspecific variation of transposable elements reveals differences in the evolutionary history of fungal phytopathogen pathotypes
AA Nakamoto, PM Joubert… - Genome Biology and …, 2023 - academic.oup.com
Transposable elements (TEs) contribute to intraspecific variation and play important roles in
the evolution of fungal genomes. However, our understanding of the processes that shape …
the evolution of fungal genomes. However, our understanding of the processes that shape …
Transposable elements in phytopathogenic Verticillium spp.: insights into genome evolution and inter- and intra-specific diversification
SG Amyotte, X Tan, K Pennerman… - BMC genomics, 2012 - Springer
Abstract Background Verticillium dahliae (Vd) and Verticillium albo-atrum (Va) are
cosmopolitan soil fungi causing very disruptive vascular diseases on a wide range of crop …
cosmopolitan soil fungi causing very disruptive vascular diseases on a wide range of crop …
Extensive chromosomal reshuffling drives evolution of virulence in an asexual pathogen
R de Jonge, MD Bolton, A Kombrink… - Genome …, 2013 - genome.cshlp.org
Sexual recombination drives genetic diversity in eukaryotic genomes and fosters adaptation
to novel environmental challenges. Although strictly asexual microorganisms are often …
to novel environmental challenges. Although strictly asexual microorganisms are often …
Dynamic virulence‐related regions of the plant pathogenic fungus Verticillium dahliae display enhanced sequence conservation
JRL Depotter, X Shi‐Kunne, H Missonnier… - Molecular …, 2019 - Wiley Online Library
Plant pathogens continuously evolve to evade host immune responses. During host
colonization, many fungal pathogens secrete effectors to perturb such responses, but these …
colonization, many fungal pathogens secrete effectors to perturb such responses, but these …
Recent transposable element bursts are associated with the proximity to genes in a fungal plant pathogen
U Oggenfuss, D Croll - PLoS Pathogens, 2023 - journals.plos.org
The activity of transposable elements (TEs) contributes significantly to pathogen genome
evolution. TEs often destabilize genome integrity but may also confer adaptive variation in …
evolution. TEs often destabilize genome integrity but may also confer adaptive variation in …
A population-level invasion by transposable elements triggers genome expansion in a fungal pathogen
Genome evolution is driven by the activity of transposable elements (TEs). The spread of
TEs can have deleterious effects including the destabilization of genome integrity and …
TEs can have deleterious effects including the destabilization of genome integrity and …
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