Deleterious Mutations Accumulate Faster in Allopolyploid Than Diploid Cotton (Gossypium) and Unequally between Subgenomes

JL Conover, JF Wendel - Molecular biology and evolution, 2022 - academic.oup.com
Whole-genome duplication (polyploidization) is among the most dramatic mutational
processes in nature, so understanding how natural selection differs in polyploids relative to …

Duplicate gene evolution, homoeologous recombination, and transcriptome characterization in allopolyploid cotton

LE Flagel, JF Wendel, JA Udall - BMC genomics, 2012 - Springer
Background Modern allotetraploid cotton contains an “A” and “D” genome from an ancestral
polyploidy event that occurred approximately 1–2 million years ago. Diploid A-and D …

Duplicated genes evolve independently after polyploid formation in cotton

RC Cronn, RL Small, JF Wendel - Proceedings of the …, 1999 - National Acad Sciences
Of the many processes that generate gene duplications, polyploidy is unique in that entire
genomes are duplicated. This process has been important in the evolution of many …

Genomic expression dominance in allopolyploids

RA Rapp, JA Udall, JF Wendel - BMC biology, 2009 - Springer
Background Allopolyploid speciation requires rapid evolutionary reconciliation of two
diverged genomes and gene regulatory networks. Here we describe global patterns of gene …

Polyploid formation in cotton is not accompanied by rapid genomic changes

B Liu, CL Brubaker, G Mergeai, RC Cronn… - Genome, 2001 - cdnsciencepub.com
Recent work has demonstrated that allopolyploid speciation in plants may be associated
with non-Mendelian genomic changes in the early generations following polyploid …

Little evidence for homoeologous gene conversion and homoeologous exchange events in Gossypium allopolyploids

JL Conover, CE Grover, J Sharbrough… - American Journal of …, 2024 - Wiley Online Library
Premise A complicating factor in analyzing allopolyploid genomes is the possibility of
physical interactions between homoeologous chromosomes during meiosis, resulting in …

Extensive and Biased Intergenomic Nonreciprocal DNA Exchanges Shaped a Nascent Polyploid Genome, Gossypium (Cotton)

H Guo, X Wang, H Gundlach, KFX Mayer… - Genetics, 2014 - academic.oup.com
Genome duplication is thought to be central to the evolution of morphological complexity,
and some polyploids enjoy a variety of capabilities that transgress those of their diploid …

In polyploids, one plus one does not equal two

SP Otto - Trends in Ecology & Evolution, 2003 - cell.com
Polyploidization has occurred often in the evolutionary history of eukaryotes, yet we are only
now learning about the genetic and epigenetic events that occur in newly formed polyploids …

Homoeologous nonreciprocal recombination in polyploid cotton

A Salmon, L Flagel, B Ying, JA Udall… - New …, 2010 - Wiley Online Library
Polyploid formation and processes that create partial genomic duplication generate
redundant genomic information, whose fate is of particular interest to evolutionary biologists …

Duplicate gene expression in allopolyploid Gossypiumreveals two temporally distinct phases of expression evolution

L Flagel, J Udall, D Nettleton, J Wendel - BMC biology, 2008 - Springer
Background Polyploidy has played a prominent role in shaping the genomic architecture of
the angiosperms. Through allopolyploidization, several modern Gossypium (cotton) species …