Genomic innovation and regulatory rewiring during evolution of the cotton genus Gossypium
M Wang, J Li, Z Qi, Y Long, L Pei, X Huang… - Nature Genetics, 2022 - nature.com
Phenotypic diversity and evolutionary innovation ultimately trace to variation in genomic
sequence and rewiring of regulatory networks. Here, we constructed a pan-genome of the …
sequence and rewiring of regulatory networks. Here, we constructed a pan-genome of the …
Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement
Polyploidy is an evolutionary innovation for many animals and all flowering plants, but its
impact on selection and domestication remains elusive. Here we analyze genome evolution …
impact on selection and domestication remains elusive. Here we analyze genome evolution …
High-quality genome assembly and resequencing of modern cotton cultivars provide resources for crop improvement
Z Ma, Y Zhang, L Wu, G Zhang, Z Sun, Z Li, Y Jiang… - Nature Genetics, 2021 - nature.com
Cotton produces natural fiber for the textile industry. The genetic effects of genomic structural
variations underlying agronomic traits remain unclear. Here, we generate two high-quality …
variations underlying agronomic traits remain unclear. Here, we generate two high-quality …
Asymmetric subgenome selection and cis-regulatory divergence during cotton domestication
Comparative population genomics offers an excellent opportunity for unraveling the genetic
history of crop domestication. Upland cotton (Gossypium hirsutum) has long been an …
history of crop domestication. Upland cotton (Gossypium hirsutum) has long been an …
The genomic basis of geographic differentiation and fiber improvement in cultivated cotton
S He, G Sun, X Geng, W Gong, P Dai, Y Jia, W Shi… - Nature Genetics, 2021 - nature.com
Large-scale genomic surveys of crop germplasm are important for understanding the
genetic architecture of favorable traits. The genomic basis of geographic differentiation and …
genetic architecture of favorable traits. The genomic basis of geographic differentiation and …
Regulatory controls of duplicated gene expression during fiber development in allotetraploid cotton
J You, Z Liu, Z Qi, Y Ma, M Sun, L Su, H Niu, Y Peng… - Nature …, 2023 - nature.com
Polyploidy complicates transcriptional regulation and increases phenotypic diversity in
organisms. The dynamics of genetic regulation of gene expression between coresident …
organisms. The dynamics of genetic regulation of gene expression between coresident …
Gossypium genomics: trends, scope, and utilization for cotton improvement
Cotton (Gossypium spp.) is the most important natural fiber crop worldwide. The diversity of
Gossypium species also provides an ideal model for investigating evolution and …
Gossypium species also provides an ideal model for investigating evolution and …
Unraveling cis and trans regulatory evolution during cotton domestication
Cis and trans regulatory divergence underlies phenotypic and evolutionary diversification.
Relatively little is understood about the complexity of regulatory evolution accompanying …
Relatively little is understood about the complexity of regulatory evolution accompanying …
Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement
Upland cotton is a model for polyploid crop domestication and transgenic improvement.
Here we sequenced the allotetraploid Gossypium hirsutum L. acc. TM-1 genome by …
Here we sequenced the allotetraploid Gossypium hirsutum L. acc. TM-1 genome by …
Comparative Evolutionary and Developmental Dynamics of the Cotton (Gossypium hirsutum) Fiber Transcriptome
The single-celled cotton (Gossypium hirsutum) fiber provides an excellent model to
investigate how human selection affects phenotypic evolution. To gain insight into the …
investigate how human selection affects phenotypic evolution. To gain insight into the …