The transcriptome landscape of developing barley seeds reveals H3K27me3 dynamics in endosperm tissues

M Kovacik, A Nowicka, J Zwyrtkov, B Strejckova… - bioRxiv, 2023 - biorxiv.org
Cereal grains are an important food and feed. To provide comprehensive spatiotemporal
information about biological processes in developing seeds of cultivated barley, we …

The transcriptome landscape of developing barley seeds

M Kovacik, A Nowicka, J Zwyrtková, B Strejčková… - The Plant …, 2024 - academic.oup.com
Cereal grains are an important source of food and feed. To provide comprehensive
spatiotemporal information about biological processes in developing seeds of cultivated …

Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat

L Zhao, Y Yang, J Chen, X Lin, H Zhang, H Wang… - Genome Biology, 2023 - Springer
Background Plant and animal embryogenesis have conserved and distinct features. Cell
fate transitions occur during embryogenesis in both plants and animals. The epigenomic …

Chromatin reprogramming and transcriptional regulation orchestrate embryogenesis in hexaploid wheat

L Zhao, X Lin, Y Yang, X Bie, H Zhang, J Chen, X Liu… - bioRxiv, 2022 - biorxiv.org
Embryogenesis represents the beginning of life cycle, but our understanding of the
regulatory circuitry in plants is far lagged to animals. Here, we draw a transcriptome …

Dynamic atlas of histone modifications and gene regulatory networks in endosperm of bread wheat

C He, S Bi, Y Li, C Song, Q Li, S Saeed, W Chen… - 2023 - researchsquare.com
Dissecting the genetic basis of seed traits in wheat is impeded by limited genetic
polymorphisms and significant variations caused by environmental conditions and seed …

Dynamic transcriptome landscape of maize embryo and endosperm development

J Chen, B Zeng, M Zhang, S Xie, G Wang… - Plant …, 2014 - academic.oup.com
Maize (Zea mays) is an excellent cereal model for research on seed development because
of its relatively large size for both embryo and endosperm. Despite the importance of seed in …

Genome-wide analysis of the H3K27me3 epigenome and transcriptome in Brassica rapa

M Payá-Milans, L Poza-Viejo, PS Martín-Uriz… - …, 2019 - academic.oup.com
Background Genome-wide maps of histone modifications have been obtained for several
plant species. However, most studies focus on model systems and do not enforce FAIR data …

Barley grain maturation and germination: metabolic pathway and regulatory network commonalities and differences highlighted by new MapMan/PageMan profiling …

N Sreenivasulu, B Usadel, A Winter, V Radchuk… - Plant …, 2008 - academic.oup.com
Plant seeds prepare for germination already during seed maturation. We performed a
detailed transcriptome analysis of barley (Hordeum vulgare) grain maturation, desiccation …

High temporal-resolution transcriptome landscape of early maize seed development

F Yi, W Gu, J Chen, N Song, X Gao, X Zhang… - The Plant …, 2019 - academic.oup.com
The early maize (Zea mays) seed undergoes several developmental stages after double
fertilization to become fully differentiated within a short period of time, but the genetic control …

Decoding the gene regulatory network of endosperm differentiation in maize

Y Yuan, Q Huo, Z Zhang, Q Wang, J Wang… - Nature …, 2024 - nature.com
The persistent cereal endosperm constitutes the majority of the grain volume. Dissecting the
gene regulatory network underlying cereal endosperm development will facilitate yield and …