Polyploidy complicates transcriptional regulation and increases phenotypic diversity in
organisms. The dynamics of genetic regulation of gene expression between coresident …

Polyploidy is an evolutionary innovation for many animals and all flowering plants, but its
impact on selection and domestication remains elusive. Here we analyze genome evolution …

Cis and trans regulatory divergence underlies phenotypic and evolutionary diversification.
Relatively little is understood about the complexity of regulatory evolution accompanying …

Phenotypic diversity and evolutionary innovation ultimately trace to variation in genomic
sequence and rewiring of regulatory networks. Here, we constructed a pan-genome of the …

Upland cotton (Gossypium hirsutum) is the most important natural fiber crop in the world.
The overall genetic diversity among cultivated species of cotton and the genetic changes …

Allotetraploid cotton species (Gossypium hirsutum and Gossypium barbadense) have long
been cultivated worldwide for natural renewable textile fibers. The draft genome sequences …

Large-scale genomic surveys of crop germplasm are important for understanding the
genetic architecture of favorable traits. The genomic basis of geographic differentiation and …

Upland cotton is a model for polyploid crop domestication and transgenic improvement.
Here we sequenced the allotetraploid Gossypium hirsutum L. acc. TM-1 genome by …

Comparative population genomics offers an excellent opportunity for unraveling the genetic
history of crop domestication. Upland cotton (Gossypium hirsutum) has long been an …

Allotetraploid cotton is an economically important natural-fiber-producing crop worldwide.
After polyploidization, Gossypium hirsutum L. evolved to produce a higher fiber yield and to …