A comprehensive phylogenomic platform for exploring the angiosperm tree of life

WJ Baker, P Bailey, V Barber, A Barker… - Systematic …, 2022 - academic.oup.com
The tree of life is the fundamental biological roadmap for navigating the evolution and
properties of life on Earth, and yet remains largely unknown. Even angiosperms (flowering …

[HTML][HTML] Global Brassicaceae phylogeny based on filtering of 1,000-gene dataset

KP Hendriks, C Kiefer, IA Al-Shehbaz, CD Bailey… - Current biology, 2023 - cell.com
The mustard family (Brassicaceae) is a scientifically and economically important family,
containing the model plant Arabidopsis thaliana and numerous crop species that feed …

A nuclear phylogenomic study of the angiosperm order Myrtales, exploring the potential and limitations of the universal Angiosperms353 probe set

O Maurin, A Anest, S Bellot, E Biffin… - American Journal of …, 2021 - Wiley Online Library
Premise To further advance the understanding of the species‐rich, economically and
ecologically important angiosperm order Myrtales in the rosid clade, comprising nine …

Exploring Angiosperms353: An open, community toolkit for collaborative phylogenomic research on flowering plants

WJ Baker, S Dodsworth, F Forest, SW Graham… - 2021 - ttu-ir.tdl.org
The unveiling of the angiosperm (flowering plant) tree of life over the past three decades has
been one of the great success stories of modern plant biology. Flowering plants underpin …

[HTML][HTML] A bird's eye view of the systematics of Convolvulaceae: novel insights from nuclear genomic data

ARG Simões, LA Eserman, AR Zuntini… - Frontiers in Plant …, 2022 - frontiersin.org
Convolvulaceae is a family of c. 2,000 species, distributed across 60 currently recognized
genera. It includes species of high economic importance, such as the crop sweet potato …

Phylogenomics reveals extreme gene tree discordance in a lineage of dominant trees: hybridization, introgression, and incomplete lineage sorting blur deep …

TGB McLay, RM Fowler, PS Fahey, DJ Murphy… - Molecular Phylogenetics …, 2023 - Elsevier
Eucalypts are a large and ecologically important group of plants on the Australian continent,
and understanding their evolution is important in understanding evolution of the unique …

[HTML][HTML] Phylogenomic analyses of Sapindales support new family relationships, rapid Mid-Cretaceous Hothouse diversification, and heterogeneous histories of gene …

EM Joyce, MS Appelhans, S Buerki, M Cheek… - Frontiers in plant …, 2023 - frontiersin.org
Sapindales is an angiosperm order of high economic and ecological value comprising nine
families, c. 479 genera, and c. 6570 species. However, family and subfamily relationships in …

Target sequence capture in orchids: Developing a kit to sequence hundreds of single‐copy loci

LA Eserman, SK Thomas, EED Coffey… - Applications in Plant …, 2021 - Wiley Online Library
Premise Understanding relationships among orchid species and populations is of critical
importance for orchid conservation. Target sequence capture has become a standard …

[HTML][HTML] How to Tackle Phylogenetic Discordance in Recent and Rapidly Radiating Groups? Developing a Workflow Using Loricaria (Asteraceae) as an Example

M Kandziora, P Sklenář, F Kolář… - Frontiers in Plant …, 2022 - frontiersin.org
A major challenge in phylogenetics and-genomics is to resolve young rapidly radiating
groups. The fast succession of species increases the probability of incomplete lineage …

[HTML][HTML] Phylogenetic analysis and development of molecular markers for five medicinal Alpinia species based on complete plastome sequences

H Yang, L Wang, H Chen, M Jiang, W Wu, S Liu… - BMC plant biology, 2021 - Springer
Background Alpinia species are widely used as medicinal herbs. To understand the
taxonomic classification and plastome evolution of the medicinal Alpinia species and …