[HTML][HTML] Nanopore sequencing technology, bioinformatics and applications

Y Wang, Y Zhao, A Bollas, Y Wang, KF Au - Nature biotechnology, 2021 - nature.com
Rapid advances in nanopore technologies for sequencing single long DNA and RNA
molecules have led to substantial improvements in accuracy, read length and throughput …

[HTML][HTML] Long walk to genomics: History and current approaches to genome sequencing and assembly

AM Giani, GR Gallo, L Gianfranceschi… - Computational and …, 2020 - Elsevier
Genomes represent the starting point of genetic studies. Since the discovery of DNA
structure, scientists have devoted great efforts to determine their sequence in an exact way …

[HTML][HTML] Komodo mlipir algorithm

S Suyanto, AA Ariyanto, AF Ariyanto - Applied Soft Computing, 2022 - Elsevier
Abstract This paper proposes Komodo Mlipir Algorithm (KMA) as a new metaheuristic
optimizer. It is inspired by two phenomena: the behavior of Komodo dragons living in the …

A brief review of vertebrate sex evolution with a pledge for integrative research: towards 'sexomics'

M Stöck, L Kratochvíl, H Kuhl… - … of the Royal …, 2021 - royalsocietypublishing.org
Triggers and biological processes controlling male or female gonadal differentiation vary in
vertebrates, with sex determination (SD) governed by environmental factors or simple to …

Sex chromosome evolution among amniotes: is the origin of sex chromosomes non-random?

L Kratochvíl, T Gamble… - … Transactions of the …, 2021 - royalsocietypublishing.org
Sex chromosomes are a great example of a convergent evolution at the genomic level,
having evolved dozens of times just within amniotes. An intriguing question is whether this …

The Tiger Rattlesnake genome reveals a complex genotype underlying a simple venom phenotype

MJ Margres, RM Rautsaw… - Proceedings of the …, 2021 - National Acad Sciences
Variation in gene regulation is ubiquitous, yet identifying the mechanisms producing such
variation, especially for complex traits, is challenging. Snake venoms provide a model …

[PDF][PDF] Large-scale snake genome analyses provide insights into vertebrate development

C Peng, DD Wu, JL Ren, ZL Peng, Z Ma, W Wu, Y Lv… - Cell, 2023 - cell.com
Snakes are a remarkable squamate lineage with unique morphological adaptations,
especially those related to the evolution of vertebrate skeletons, organs, and sensory …

The squamate tree of life

TR Simões, RA Pyron - Bulletin of the Museum of Comparative Zoology, 2021 - BioOne
Squamates (lizards, snakes, and their kin such as amphisbaenians, or “worm lizards”)
represent the world's most diverse clade of terrestrial vertebrates with∼ 11,000 described …

[HTML][HTML] Applications and trends of machine learning in genomics and phenomics for next-generation breeding

S Esposito, D Carputo, T Cardi, P Tripodi - Plants, 2019 - mdpi.com
Crops are the major source of food supply and raw materials for the processing industry. A
balance between crop production and food consumption is continually threatened by plant …

[HTML][HTML] Why do some vertebrates have microchromosomes?

K Srikulnath, SF Ahmad, W Singchat, T Panthum - Cells, 2021 - mdpi.com
With more than 70,000 living species, vertebrates have a huge impact on the field of biology
and research, including karyotype evolution. One prominent aspect of many vertebrate …