Xenogeneic silencing and its impact on bacterial genomes

K Singh, JN Milstein, WW Navarre - Annual review of …, 2016 - annualreviews.org
The H-NS (heat-stable nucleoid structuring) protein affects both nucleoid compaction and
global gene regulation. H-NS appears to act primarily as a silencer of AT-rich genetic …

The architects of bacterial DNA bridges: a structurally and functionally conserved family of proteins

L Qin, AM Erkelens, F Ben Bdira… - Open biology, 2019 - royalsocietypublishing.org
Every organism across the tree of life compacts and organizes its genome with architectural
chromatin proteins. While eukaryotes and archaea express histone proteins, the …

Bridged filaments of histone-like nucleoid structuring protein pause RNA polymerase and aid termination in bacteria

MV Kotlajich, DR Hron, BA Boudreau, Z Sun… - Elife, 2015 - elifesciences.org
Bacterial H-NS forms nucleoprotein filaments that spread on DNA and bridge distant DNA
sites. H-NS filaments co-localize with sites of Rho-dependent termination in Escherichia coli …

Mechanism of environmentally driven conformational changes that modulate H-NS DNA-bridging activity

RA van der Valk, J Vreede, L Qin, GF Moolenaar… - Elife, 2017 - elifesciences.org
Bacteria frequently need to adapt to altered environmental conditions. Adaptation requires
changes in gene expression, often mediated by global regulators of transcription. The …

H-NS-like nucleoid-associated proteins, mobile genetic elements and horizontal gene transfer in bacteria

CJ Dorman - Plasmid, 2014 - Elsevier
Horizontal gene transfer plays an important role in the evolution of bacterial species,
conferring new genetic traits on the recipient bacterium that extend its range of phenotypes …

StpA and Hha stimulate pausing by RNA polymerase by promoting DNA–DNA bridging of H-NS filaments

BA Boudreau, DR Hron, L Qin… - Nucleic acids …, 2018 - academic.oup.com
In enterobacteria, AT-rich horizontally acquired genes, including virulence genes, are
silenced through the actions of at least three nucleoid-associated proteins (NAPs): H-NS …

Function of nucleoid-associated proteins in chromosome structuring and transcriptional regulation

CJ Dorman - Journal of molecular microbiology and biotechnology, 2015 - karger.com
Nucleoid-associated proteins typically are abundant, low-molecular-mass polypeptides that
bind DNA and alter its shape and its ability to participate in transactions such as …

H-NS and RNA polymerase: a love–hate relationship?

R Landick, JT Wade, DC Grainger - Current opinion in microbiology, 2015 - Elsevier
Highlights•Similarities in the DNA binding properties of H-NS and RNA polymerase.•
Interactions between H-NS and RNA polymerase throughout the transcription cycle.•H-NS …

Hierarchy of transcription factor network in Escherichia coli K-12: H-NS-mediated silencing and Anti-silencing by global regulators

A Ishihama, T Shimada - FEMS Microbiology Reviews, 2021 - academic.oup.com
Transcriptional regulation for genome expression determines growth and adaptation of
single-cell bacteria that are directly exposed to environment. The transcriptional apparatus …

Two Trk/Ktr/HKT-type potassium transporters, TrkG and TrkH, perform distinct functions in Escherichia coli K-12

E Tanudjaja, N Hoshi, K Yamamoto, K Ihara… - Journal of Biological …, 2023 - ASBMB
Escherichia coli K-12 possesses two versions of Trk/Ktr/HKT-type potassium ion (K+)
transporters, TrkG and TrkH. The current paradigm is that TrkG and TrkH have largely …