Base editing: advances and therapeutic opportunities
EM Porto, AC Komor, IM Slaymaker… - Nature Reviews Drug …, 2020 - nature.com
Base editing—the introduction of single-nucleotide variants (SNVs) into DNA or RNA in
living cells—is one of the most recent advances in the field of genome editing. As around …
living cells—is one of the most recent advances in the field of genome editing. As around …
Means, mechanisms and consequences of adenine methylation in DNA
K Boulias, EL Greer - Nature Reviews Genetics, 2022 - nature.com
Abstract N 6-methyl-2′-deoxyadenosine (6mA or m6dA) has been reported in the DNA of
prokaryotes and eukaryotes ranging from unicellular protozoa and algae to multicellular …
prokaryotes and eukaryotes ranging from unicellular protozoa and algae to multicellular …
Evaluation and minimization of Cas9-independent off-target DNA editing by cytosine base editors
Cytosine base editors (CBEs) enable targeted C• G-to-T• A conversions in genomic DNA.
Recent studies report that BE3, the original CBE, induces a low frequency of genome-wide …
Recent studies report that BE3, the original CBE, induces a low frequency of genome-wide …
Programmable base editing of A• T to G• C in genomic DNA without DNA cleavage
The spontaneous deamination of cytosine is a major source of transitions from C• G to T• A
base pairs, which account for half of known pathogenic point mutations in humans. The …
base pairs, which account for half of known pathogenic point mutations in humans. The …
DNA damage responses and p53 in the aging process
HL Ou, B Schumacher - Blood, The Journal of the American …, 2018 - ashpublications.org
The genome is constantly attacked by genotoxic insults. DNA damage has long been
established as a cause of cancer development through its mutagenic consequences …
established as a cause of cancer development through its mutagenic consequences …
Viral mutation rates
R Sanjuán, MR Nebot, N Chirico, LM Mansky… - Journal of …, 2010 - Am Soc Microbiol
Accurate estimates of virus mutation rates are important to understand the evolution of the
viruses and to combat them. However, methods of estimation are varied and often complex …
viruses and to combat them. However, methods of estimation are varied and often complex …
[HTML][HTML] Microsatellite instability in colorectal cancer
JN Nojadeh, SB Sharif, E Sakhinia - EXCLI journal, 2018 - ncbi.nlm.nih.gov
Colorectal cancer (CRC) is a heterogeneous disease that is caused by the interaction of
genetic and environmental factors. Although it is one of the most common cancers …
genetic and environmental factors. Although it is one of the most common cancers …
CRISPR-Cas12a has widespread off-target and dsDNA-nicking effects
Cas12a (Cpf1) is an RNA-guided endonuclease in the bacterial type VA CRISPR-Cas anti-
phage immune system that can be repurposed for genome editing. Cas12a can bind and cut …
phage immune system that can be repurposed for genome editing. Cas12a can bind and cut …
DNA methyltransferases and epigenetic regulation in bacteria
S Adhikari, PD Curtis - FEMS microbiology reviews, 2016 - academic.oup.com
Epigenetics is a change in gene expression that is heritable without a change in DNA
sequence itself. This phenomenon is well studied in eukaryotes, particularly in humans for …
sequence itself. This phenomenon is well studied in eukaryotes, particularly in humans for …
DNA methylation and cancer diagnosis
Y Delpu, P Cordelier, WC Cho, J Torrisani - International journal of …, 2013 - mdpi.com
DNA methylation is a major epigenetic modification that is strongly involved in the
physiological control of genome expression. DNA methylation patterns are largely modified …
physiological control of genome expression. DNA methylation patterns are largely modified …