A method for calling gains and losses in array CGH data

P Wang, Y Kim, J Pollack, B Narasimhan… - Biostatistics, 2005 - academic.oup.com
Array CGH is a powerful technique for genomic studies of cancer. It enables one to carry out
genome-wide screening for regions of genetic alterations, such as chromosome gains and …

Options available—from start to finish—for obtaining data from DNA microarrays II

AJ Holloway, RK Van Laar, RW Tothill, DDL Bowtell - Nature genetics, 2002 - nature.com
Microarray technology has undergone a rapid evolution. With widespread interest in large-
scale genomic research, an abundance of equipment and reagents have now become …

Sequence-based karyotyping

R Shimkets, M Braverman - US Patent App. 10/971,614, 2005 - Google Patents
(57) ABSTRACT A neW method for genomic analysis, termed “Sequence Based
Karyotyping,” is described. Sequence-Based Karyo typing methods for the detection of …

[HTML][HTML] Expression of the progenitor marker NG2/CSPG4 predicts poor survival and resistance to ionising radiation in glioblastoma

A Svendsen, JJC Verhoeff, H Immervoll… - Acta …, 2011 - Springer
Glioblastoma (GBM) is a highly aggressive brain tumour, where patients respond poorly to
radiotherapy and exhibit dismal survival outcomes. The mechanisms of radioresistance are …

Generalized methods and solvers for noise removal from piecewise constant signals. I. Background theory

MA Little, NS Jones - Proceedings of the Royal Society A …, 2011 - royalsocietypublishing.org
Removing noise from piecewise constant (PWC) signals is a challenging signal processing
problem arising in many practical contexts. For example, in exploration geosciences, noisy …

A genome-wide survey of structural variation between human and chimpanzee

TL Newman, E Tuzun, VA Morrison… - Genome …, 2005 - genome.cshlp.org
Structural changes (deletions, insertions, and inversions) between human and chimpanzee
genomes have likely had a significant impact on lineage-specific evolution because of their …

[图书][B] Nanotechnology in biology and medicine: methods, devices, and applications

T Vo-Dinh - 2007 - taylorfrancis.com
The combination of biology and nanotechnology has led to a new generation of
nanodevices that make it possible to characterize the chemical, mechanical, and other …

[HTML][HTML] The screening and ranking algorithm to detect DNA copy number variations

YS Niu, H Zhang - The annals of applied statistics, 2012 - ncbi.nlm.nih.gov
DNA Copy number variation (CNV) has recently gained considerable interest as a source of
genetic variation that likely influences phenotypic differences. Many statistical and …

BAC to the future! or oligonucleotides: a perspective for micro array comparative genomic hybridization (array CGH)

B Ylstra, P van den IJssel, B Carvalho… - Nucleic acids …, 2006 - academic.oup.com
The array CGH technique (Array Comparative Genome Hybridization) has been developed
to detect chromosomal copy number changes on a genome-wide and/or high-resolution …

[HTML][HTML] Genetic alteration and gene expression modulation during cancer progression

C Garnis, TPH Buys, WL Lam - Molecular Cancer, 2004 - Springer
Cancer progresses through a series of histopathological stages. Progression is thought to
be driven by the accumulation of genetic alterations and consequently gene expression …