Sangerbox: A comprehensive, interaction‐friendly clinical bioinformatics analysis platform

W Shen, Z Song, X Zhong, M Huang, D Shen, P Gao… - Imeta, 2022 - Wiley Online Library
In recent decades, with the continuous development of high‐throughput sequencing
technology, data volume in medical research has increased, at the same time, almost all …

Inter-bacterial mutualism promoted by public goods in a system characterized by deterministic temperature variation

Y Zhao, Z Liu, B Zhang, J Cai, X Yao, M Zhang… - Nature …, 2023 - nature.com
Mutualism is commonly observed in nature but not often reported for bacterial communities.
Although abiotic stress is thought to promote microbial mutualism, there is a paucity of …

ggClusterNet: An R package for microbiome network analysis and modularity‐based multiple network layouts

T Wen, P Xie, S Yang, G Niu, X Liu, Z Ding, C Xue… - Imeta, 2022 - Wiley Online Library
The network analysis has attracted increasing attention and interest from ecological
academics, thus it is of great necessity to develop more convenient and powerful tools. For …

Temperature‐mediated microbial carbon utilization in China's lakes

Y Guo, S Gu, K Wu, AJ Tanentzap, J Yu… - Global Change …, 2023 - Wiley Online Library
Microbes play an important role in aquatic carbon cycling but we have a limited
understanding of their functional responses to changes in temperature across large …

Soil microbial community composition and co-occurrence network responses to mild and severe disturbances in volcanic areas

J Chen, Q Xiao, D Xu, Z Li, L Chao, X Li, H Liu… - Science of the Total …, 2023 - Elsevier
Soil physicochemical properties and vegetation types are the main factors affecting soil
microorganisms, but there are few studies on the effects of the disturbance following …

Spatiotemporal successions of N, S, C, Fe, and as cycling genes in groundwater of a wetland ecosystem: enhanced heterogeneity in wet season

X Chen, Y Sheng, G Wang, P Zhou, F Liao, H Mao… - Water Research, 2024 - Elsevier
Microorganisms in wetland groundwater play an essential role in driving global
biogeochemical cycles. However, largely due to the dynamics of spatiotemporal surface …

Insight into the mechanism of nano-TiO2-doped biochar in mitigating cadmium mobility in soil-pak choi system

J Liu, T He, Z Yang, S Peng, Y Zhu, H Li, D Lu… - Science of The Total …, 2024 - Elsevier
Soil cadmium (Cd) pollution poses severe threats to food security and human health.
Previous studies have reported that both nanoparticles (NPs) and biochar have potential for …

Deciphering the mechanism of fungal pathogen‐induced disease‐suppressive soil

T Wen, Z Ding, LS Thomashow, L Hale, S Yang… - New …, 2023 - Wiley Online Library
One model of a disease‐suppressive soil predicts that the confrontation of plant with a
phytopathogen can lead to the recruitment and accumulation of beneficial microorganisms …

Decreased soil multifunctionality is associated with altered microbial network properties under precipitation reduction in a semiarid grassland

X Wang, Q Zhang, Z Zhang, W Li, W Liu, N Xiao, H Liu… - IMeta, 2023 - Wiley Online Library
Decreased precipitation significantly suppressed the nutrient provisioning, microbial growth
efficiency, LOM decomposition, and thus, the averaging multifunctionality by 42.6%(p< …

Divergent rhizosphere and non‐rhizosphere soil microbial structure and function in long‐term warmed steppe due to altered root exudation

Y Yu, Y Zhou, IA Janssens, Y Deng, X He… - Global Change …, 2024 - Wiley Online Library
While there is an extensive body of research on the influence of climate warming on total soil
microbial communities, our understanding of how rhizosphere and non‐rhizosphere soil …