Experimental tests of the bacterial distance–decay relationship

T Bell - The ISME journal, 2010 - academic.oup.com
Community similarity declines with increasing geographic distance if species tend to be
locally adapted or if they are dispersal limited. The distance–decay of similarity has been …

A systematics for discovering the fundamental units of bacterial diversity

FM Cohan, EB Perry - Current biology, 2007 - cell.com
Bacterial systematists face unique challenges when trying to identify ecologically meaningful
units of biological diversity. Whereas plant and animal systematists are guided by a theory …

The bacterial species dilemma and the genomic–phylogenetic species concept

JT Staley - … Transactions of the Royal Society B …, 2006 - royalsocietypublishing.org
The number of species of Bacteria and Archaea (ca 5000) is surprisingly small considering
their early evolution, genetic diversity and residence in all ecosystems. The bacterial species …

Ancient origins determine global biogeography of hot and cold desert cyanobacteria

J Bahl, MCY Lau, GJD Smith, D Vijaykrishna… - Nature …, 2011 - nature.com
Factors governing large-scale spatio-temporal distribution of microorganisms remain
unresolved, yet are pivotal to understanding ecosystem value and function. Molecular …

The nineteenth century roots of'everything is everywhere'

MA O'Malley - Nature Reviews Microbiology, 2007 - nature.com
The identification of geographical patterns in microbial distributions has begun to challenge
purely ecological explanations of biogeography and the underlying principle of “everything …

Global distribution of cyanobacterial ecotypes in the cold biosphere

AD Jungblut, C Lovejoy, WF Vincent - The ISME Journal, 2010 - academic.oup.com
Perennially cold habitats are diminishing as a result of climate change; however, little is
known of the diversity or biogeography of microbes that thrive in such environments. Here …

The changing face of pathogen discovery and surveillance

WI Lipkin - Nature Reviews Microbiology, 2013 - nature.com
The pace of pathogen discovery is rapidly accelerating. This reflects not only factors that
enable the appearance and globalization of new microbial infections, but also improvements …

On the origin of prokaryotic species

WF Doolittle, O Zhaxybayeva - Genome research, 2009 - genome.cshlp.org
The notion that all prokaryotes belong to genomically and phenomically cohesive clusters
that we might legitimately call “species” is a contentious one. At issue are (1) whether such …

GC-content evolution in bacterial genomes: the biased gene conversion hypothesis expands

F Lassalle, S Périan, T Bataillon, X Nesme… - PLoS …, 2015 - journals.plos.org
The characterization of functional elements in genomes relies on the identification of the
footprints of natural selection. In this quest, taking into account neutral evolutionary …

Biogeography of the Sulfolobus islandicus pan-genome

ML Reno, NL Held, CJ Fields… - Proceedings of the …, 2009 - National Acad Sciences
Variation in gene content has been hypothesized to be the primary mode of adaptive
evolution in microorganisms; however, very little is known about the spatial and temporal …