Combining deep neural networks for protein secondary structure prediction
S Zhou, H Zou, C Liu, M Zang, T Liu - IEEE Access, 2020 - ieeexplore.ieee.org
By combining convolutional neural networks (CNN) and long short term memory networks
(LSTM) into the learning structure, this paper presents a supervised learning method called …
(LSTM) into the learning structure, this paper presents a supervised learning method called …
Use of tetrapeptide signals for protein secondary-structure prediction
Y Feng, L Luo - Amino acids, 2008 - Springer
This paper develops a novel sequence-based method, tetra-peptide-based increment of
diversity with quadratic discriminant analysis (TPIDQD for short), for protein secondary …
diversity with quadratic discriminant analysis (TPIDQD for short), for protein secondary …
Protein Secondary Structure Prediction Using Cascaded Feature Learning Model
The protein secondary structure prediction (PSSP) is pivotal for predicting tertiary structure,
which is proliferating in demand for drug design and development. Further, it can be used to …
which is proliferating in demand for drug design and development. Further, it can be used to …
A deep convolutional neural network to improve the prediction of protein secondary structure
L Guo, Q Jiang, X Jin, L Liu, W Zhou, S Yao… - Current …, 2020 - ingentaconnect.com
Background: Protein secondary structure prediction (PSSP) is a fundamental task in
bioinformatics that is helpful for understanding the three-dimensional structure and …
bioinformatics that is helpful for understanding the three-dimensional structure and …
A hybrid method for prediction of protein secondary structure based on multiple artificial neural networks
The prediction of protein secondary structure is the method of finding the way in which an
amino acid sequence causes the protein structure to fold and bend into alpha helices, beta …
amino acid sequence causes the protein structure to fold and bend into alpha helices, beta …
Differential evolution for protein structure prediction using the HP model
J Santos, M Diéguez - International work-conference on the interplay …, 2011 - Springer
Abstract We used Differential Evolution (DE) for the problem of protein structure prediction.
We employed the HP model to represent the folding conformations of a protein in a lattice. In …
We employed the HP model to represent the folding conformations of a protein in a lattice. In …
Computational prediction of secondary and supersecondary structures
K Chen, L Kurgan - Protein supersecondary structures, 2013 - Springer
The sequence-based prediction of the secondary and supersecondary structures enjoys
strong interest and finds applications in numerous areas related to the characterization and …
strong interest and finds applications in numerous areas related to the characterization and …
A new deep neighbor residual network for protein secondary structure prediction
A protein secondary structure defines the local conformation of the protein's polypeptide
backbone, which provides important information for protein 3D structure prediction and …
backbone, which provides important information for protein 3D structure prediction and …
PSSP with dynamic weighted kernel fusion based on SVM-PHGS
MH Zangooei, S Jalili - Knowledge-Based Systems, 2012 - Elsevier
Since 1960s, researchers have proposed several prediction methods, for protein secondary
structure prediction (PSSP), whereas the accuracy of them is no more than 80%. In this case …
structure prediction (PSSP), whereas the accuracy of them is no more than 80%. In this case …
[HTML][HTML] Improving protein secondary structure prediction based on short subsequences with local structure similarity
Background When characterizing the structural topology of proteins, protein secondary
structure (PSS) plays an important role in analyzing and modeling protein structures …
structure (PSS) plays an important role in analyzing and modeling protein structures …