Environmental stress and transposons in plants

H Ito - Genes & Genetic Systems, 2022 - jstage.jst.go.jp
Transposons were once thought to be junk repetitive DNA in the genome. However, their
importance gradually became apparent as it became clear that they regulate gene …

Transposons contribute to the functional diversification of the head, gut, and ovary transcriptomes across Drosophila natural strains

M Coronado-Zamora, J González - Genome research, 2023 - genome.cshlp.org
Transcriptomes are dynamic, with cells, tissues, and body parts expressing particular sets of
transcripts. Transposable elements (TEs) are a known source of transcriptome diversity; …

Transposable elements maintain genome-wide heterozygosity in inbred populations

H De Kort, S Legrand, O Honnay, J Buckley - Nature Communications, 2022 - nature.com
Elevated levels of inbreeding increase the risk of inbreeding depression and extinction, yet
many inbred species are widespread, suggesting that inbreeding has little impact on …

Biological invasion: The influence of the hidden side of the (epi) genome

P Marin, J Genitoni, D Barloy, S Maury… - Functional …, 2020 - Wiley Online Library
Understanding the mechanisms underlying biological invasions and rapid adaptation to
global change remains a fundamental challenge, particularly in small populations lacking in …

Chromosome restructuring and number change during the evolution of Morus notabilis and Morus alba

Y Xuan, B Ma, D Li, Y Tian, Q Zeng, N He - Horticulture research, 2022 - academic.oup.com
Mulberry (Morus spp.) is an economically important plant as the main food plant used for
rearing domesticated silkworm and it has multiple uses in traditional Chinese medicine. Two …

Adaptation through chromosomal inversions in Anopheles

D Ayala, A Ullastres, J González - Frontiers in Genetics, 2014 - frontiersin.org
Chromosomal inversions have been repeatedly involved in local adaptation in a large
number of animals and plants. The ecological and behavioral plasticity of Anopheles …

Karyotype differentiation in 19 species of river loach fishes (Nemacheilidae, Teleostei): extensive variability associated with rDNA and heterochromatin distribution …

A Sember, J Bohlen, V Šlechtová, M Altmanova… - BMC Evolutionary …, 2015 - Springer
Background Loaches of the family Nemacheilidae are one of the most speciose elements of
Palearctic freshwater ichthyofauna and have undergone rapid ecological adaptations and …

De novo genome assemblies of butterflies

EA Ellis, CG Storer, AY Kawahara - GigaScience, 2021 - academic.oup.com
Background The availability of thousands of genomes has enabled new advancements in
biology. However, many genomes have not been investigated for their quality. Here we …

[HTML][HTML] Genome-wide estimates of transposable element insertion and deletion rates in Drosophila melanogaster

JR Adrion, MJ Song, DR Schrider… - Genome biology and …, 2017 - academic.oup.com
Knowing the rate at which transposable elements (TEs) insert and delete is critical for
understanding their role in genome evolution. We estimated spontaneous rates of insertion …

The ecology of palm genomes: repeat‐associated genome size expansion is constrained by aridity

RJ Schley, J Pellicer, XJ Ge, C Barrett, S Bellot… - New …, 2022 - Wiley Online Library
Genome size varies 2400‐fold across plants, influencing their evolution through changes in
cell size and cell division rates which impact plants' environmental stress tolerance …