Host specificity of the gut microbiome

EK Mallott, KR Amato - Nature Reviews Microbiology, 2021 - nature.com
Developing general principles of host–microorganism interactions necessitates a robust
understanding of the eco-evolutionary processes that structure microbiota. Phylosymbiosis …

Comparative analyses of vertebrate gut microbiomes reveal convergence between birds and bats

SJ Song, JG Sanders, F Delsuc, J Metcalf, K Amato… - MBio, 2020 - Am Soc Microbiol
Diet and host phylogeny drive the taxonomic and functional contents of the gut microbiome
in mammals, yet it is unknown whether these patterns hold across all vertebrate lineages …

[HTML][HTML] Phylosymbiosis: relationships and functional effects of microbial communities across host evolutionary history

AW Brooks, KD Kohl, RM Brucker, EJ van Opstal… - PLoS …, 2016 - journals.plos.org
Phylosymbiosis was recently proposed to describe the eco-evolutionary pattern, whereby
the ecological relatedness of host-associated microbial communities parallels the phylogeny …

[HTML][HTML] The seed microbiome: origins, interactions, and impacts

EB Nelson - Plant and Soil, 2018 - Springer
Background The development and dispersal of seeds as well as their transition to seedlings
represent perhaps the most critical stages of a plant's life cycle. The endophytic and …

Not all animals need a microbiome

TJ Hammer, JG Sanders, N Fierer - FEMS microbiology letters, 2019 - academic.oup.com
It is often taken for granted that all animals host and depend upon a microbiome, yet this has
only been shown for a small proportion of species. We propose that animals span a …

An introduction to phylosymbiosis

SJ Lim, SR Bordenstein - Proceedings of the Royal …, 2020 - royalsocietypublishing.org
Phylosymbiosis was recently formulated to support a hypothesis-driven framework for the
characterization of a new, cross-system trend in host-associated microbiomes. Defining …

Avian gut microbiomes taking flight

KH Bodawatta, SM Hird, K Grond, M Poulsen… - Trends in …, 2022 - cell.com
Birds harbor complex gut bacterial communities that may sustain their ecologies and
facilitate their biological roles, distribution, and diversity. Research on gut microbiomes in …

The avian gut microbiota: community, physiology and function in wild birds

K Grond, BK Sandercock, A Jumpponen… - Journal of Avian …, 2018 - Wiley Online Library
Gastrointestinal microbiota play a vital role in maintaining organismal health, through
facilitating nutrient uptake, detoxification and interactions with the immune system. The …

[HTML][HTML] The avian gut microbiota: Diversity, influencing factors, and future directions

F Sun, J Chen, K Liu, M Tang, Y Yang - Frontiers in Microbiology, 2022 - frontiersin.org
The gut microbiota is viewed as the “second genome” of animals, sharing intricate
relationships with their respective hosts. Because the gut microbial community and its …

Rates of gut microbiome divergence in mammals

AH Nishida, H Ochman - Molecular ecology, 2018 - Wiley Online Library
The variation and taxonomic diversity among mammalian gut microbiomes raises several
questions about the factors that contribute to the rates and patterns of change in these …