Omics in the Red Palm Weevil Rhynchophorus ferrugineus (Olivier) (Coleoptera: Curculionidae): A Bridge to the Pest

MM Manee, FH Alqahtani, BM Al-Shomrani… - Insects, 2023 - mdpi.com
Simple Summary The red palm weevil (RPW) Rhynchophorus ferrugineus (Coleoptera:
Curculionidae) is a species of beetle that depends on palm trees to complete its life cycle …

Tracking adaptive pathways of invasive insects: novel insight from genomics

Z Sun, Y Chen, Y Chen, Z Lu, F Gui - International Journal of Molecular …, 2023 - mdpi.com
Despite the huge human and economic costs of invasive insects, which are the main group
of invasive species, their environmental impacts through various mechanisms remain …

Low-input PacBio sequencing generates high-quality individual fly genomes and characterizes mutational processes

H Jia, S Tan, Y Cai, Y Guo, J Shen, Y Zhang… - Nature …, 2024 - nature.com
Long-read sequencing, exemplified by PacBio, revolutionizes genomics, overcoming
challenges like repetitive sequences. However, the high DNA requirement (> 1 µg) is …

Genomic resources for population analyses of an invasive insect pest Oryctes rhinoceros

I Filipović - Scientific Data, 2023 - nature.com
Over the last few years, various types of NGS data have been accumulating for the coconut
rhinoceros beetle (CRB, Oryctes rhinoceros), reflecting the growing interest in curtailing this …

Highly-multiplexed and efficient long-amplicon PacBio and Nanopore sequencing of hundreds of full mitochondrial genomes

BR Karin, S Arellano, L Wang, K Walzer, A Pomerantz… - BMC genomics, 2023 - Springer
Background Mitochondrial genome sequences have become critical to the study of
biodiversity. Genome skimming and other short-read based methods are the most common …

The genome of the soybean gall midge (Resseliella maxima)

G Melotto, MW Jones, K Bosley, N Flack… - G3: Genes …, 2023 - academic.oup.com
The cecidomyiid fly, soybean gall midge, Resseliella maxima Gagné, is a recently
discovered insect that feeds on soybean plants in the Midwestern United States. R. maxima …

[HTML][HTML] Finding divergent sequences of homomorphic sex chromosomes via diploidized nanopore-based assembly from a single male

I Filipović, JM Marshall, G Rašić - bioRxiv, 2024 - ncbi.nlm.nih.gov
Although homomorphic sex chromosomes can have non-recombining regions with elevated
sequence divergence between its complements, such divergence signals can be difficult to …

[PDF][PDF] MtGenome for the cost of a gene: Long-amplicon PacBio and Nanopore sequencing of hundreds of full mitochondrial genomes

BR Karin, S Arellano, L Wang, K Walzer, A Pomerantz… - 2022 - scholar.archive.org
Results: With the PacBio data we recovered at least one of the two fragments for 96% of 28
samples (~ 80% of input amplicons) with mean coverage~ 1,500 x. The ONT data recovered …